About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s132.g0017.t1
Lsat_s132.g0018.t1
Lsat_s132.g0019.t1IRE1-RELATED
Lsat_s133.g0001.t1
Lsat_s133.g0002.t1
Lsat_s133.g0003.t1
Lsat_s133.g0004.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s133.g0005.t1
Lsat_s133.g0006.t1
Lsat_s133.g0007.t1
Lsat_s133.g0008.t1
Lsat_s133.g0009.t1
Lsat_s133.g0010.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s133.g0011.t1
Lsat_s133.g0012.t1
Lsat_s133.g0013.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s133.g0014.t1
Lsat_s133.g0015.t1
Lsat_s133.g0016.t1
Lsat_s133.g0017.t1
Lsat_s134.g0001.t1
Lsat_s134.g0002.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s134.g0003.t1
Lsat_s134.g0004.t1
Lsat_s134.g0005.t1
Lsat_s134.g0006.t1
Lsat_s134.g0007.t1
Lsat_s134.g0008.t1
Lsat_s134.g0009.t1PHD-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s134.g0010.t1
Lsat_s134.g0011.t1
Lsat_s134.g0012.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s134.g0013.t1
Lsat_s135.g0001.t1
Lsat_s135.g0002.t1
Lsat_s135.g0003.t1
Lsat_s135.g0004.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s135.g0005.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s135.g0006.t1
Lsat_s135.g0007.t1
Lsat_s135.g0008.t1
Lsat_s135.g0009.t1
Lsat_s136.g0001.t1
Lsat_s136.g0002.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s137.g0001.t1UPF0147 PROTEIN MJ1419
Lsat_s137.g0002.t1
Lsat_s137.g0003.t1
Lsat_s137.g0004.t1
Lsat_s137.g0005.t1
Lsat_s137.g0006.t1
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