Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00227510 | |
| SKAU_T00227520 | MUSCLEBLIND-LIKE PROTEIN |
| SKAU_T00227530 | SUA5 |
| SKAU_T00227540 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00227550 | GLYCOSYL TRANSFERASE-RELATED |
| SKAU_T00227560 | COILIN |
| SKAU_T00227570 | CYTOKINE RECEPTOR |
| SKAU_T00227580 | P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN |
| SKAU_T00227590 | FORKHEAD BOX PROTEIN O |
| SKAU_T00227600 | RE52028P |
| SKAU_T00227610 | |
| SKAU_T00227620 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| SKAU_T00227630 | |
| SKAU_T00227640 | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN |
| SKAU_T00227650 | SERINE PROTEASE |
| SKAU_T00227660 | PREFOLDIN SUBUNIT 3 |
| SKAU_T00227670 | DRAB11-RELATED |
| SKAU_T00227680 | |
| SKAU_T00227690 | CLATHRIN ASSEMBLY PROTEIN |
| SKAU_T00227700 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00227710 | DIACYLGLYCEROL KINASE |
| SKAU_T00227720 | WASP-1 |
| SKAU_T00227730 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00227740 | |
| SKAU_T00227750 | |
| SKAU_T00227760 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00227770 | |
| SKAU_T00227780 | |
| SKAU_T00227790 | A KINASE ANCHOR PROTEIN |
| SKAU_T00227800 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00227810 | RE74312P |
| SKAU_T00227820 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00227830 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| SKAU_T00227840 | SKP1 |
| SKAU_T00227850 | VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL |
| SKAU_T00227860 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00227870 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00227880 | |
| SKAU_T00227890 | CONNEXIN |
| SKAU_T00227900 | |
| SKAU_T00227910 | CONNEXIN |
| SKAU_T00227920 | TUDOR DOMAIN CONTAINING PROTEIN |
| SKAU_T00227930 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00227940 | PROTEIN EIGER |
| SKAU_T00227950 | PROTEIN EIGER |
| SKAU_T00227960 | TRANSMEMBRANE PROTEIN FAM155 |
| SKAU_T00227970 | EPHRIN |
| SKAU_T00227980 | |
| SKAU_T00227990 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00228000 | GLYCOPROTEIN HORMONE RECEPTOR |
