Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00229010 | RNA RECOGNITION MOTIF-CONTAINING |
| SKAU_T00229020 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| SKAU_T00229030 | |
| SKAU_T00229040 | VACUOLAR ATPASE ASSEMBLY INTEGRAL MEMBRANE PROTEIN VMA21 |
| SKAU_T00229050 | CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT |
| SKAU_T00229060 | RING ZINC FINGER |
| SKAU_T00229070 | AGAP000124-PA |
| SKAU_T00229080 | |
| SKAU_T00229090 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| SKAU_T00229100 | |
| SKAU_T00229110 | |
| SKAU_T00229120 | |
| SKAU_T00229130 | |
| SKAU_T00229140 | |
| SKAU_T00229150 | |
| SKAU_T00229160 | |
| SKAU_T00229170 | BETA-GALACTOSIDE ALPHA-2,6-SIALYLTRANSFERASE |
| SKAU_T00229180 | OPSIN |
| SKAU_T00229190 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
| SKAU_T00229200 | STIMULATOR OF INTERFERON GENES PROTEIN |
| SKAU_T00229210 | |
| SKAU_T00229220 | DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4 |
| SKAU_T00229230 | BROMODOMAIN-CONTAINING PROTEIN 8 |
| SKAU_T00229240 | AUGURIN |
| SKAU_T00229250 | |
| SKAU_T00229260 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| SKAU_T00229270 | |
| SKAU_T00229280 | |
| SKAU_T00229290 | FOUR AND A HALF LIM DOMAINS PROTEIN |
| SKAU_T00229300 | CNH DOMAIN CONTAINING |
| SKAU_T00229310 | |
| SKAU_T00229320 | |
| SKAU_T00229330 | |
| SKAU_T00229340 | POU DOMAIN |
| SKAU_T00229350 | |
| SKAU_T00229360 | |
| SKAU_T00229370 | |
| SKAU_T00229380 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00229390 | |
| SKAU_T00229400 | |
| SKAU_T00229410 | G-PROTEIN COUPLED RECEPTOR 89-RELATED |
| SKAU_T00229420 | PDZ DOMAIN CONTAINING PROTEIN |
| SKAU_T00229430 | |
| SKAU_T00229440 | |
| SKAU_T00229450 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00229460 | |
| SKAU_T00229470 | TRANSMEMBRANE PROTEIN FAM155 |
| SKAU_T00229480 | |
| SKAU_T00229490 | |
| SKAU_T00229500 |
