Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00230510 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| SKAU_T00230520 | |
| SKAU_T00230530 | |
| SKAU_T00230540 | |
| SKAU_T00230550 | |
| SKAU_T00230560 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| SKAU_T00230570 | GLYCOSYLTRANSFERASE-LIKE 1 |
| SKAU_T00230580 | HISTONE H4 TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00230590 | |
| SKAU_T00230600 | |
| SKAU_T00230610 | |
| SKAU_T00230620 | |
| SKAU_T00230630 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| SKAU_T00230640 | ORIGIN RECOGNITION COMPLEX SUBUNIT 4 |
| SKAU_T00230650 | METHYL-CPG BINDING PROTEIN, DROSOPHILA |
| SKAU_T00230660 | METHYL-CPG BINDING PROTEIN, DROSOPHILA |
| SKAU_T00230670 | ENHANCER OF POLYCOMB |
| SKAU_T00230680 | CENTROMERE PROTEIN E |
| SKAU_T00230690 | LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00230700 | MY011 PROTEIN |
| SKAU_T00230710 | |
| SKAU_T00230720 | RHO FAMILY GTPASE |
| SKAU_T00230730 | |
| SKAU_T00230740 | INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN |
| SKAU_T00230750 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| SKAU_T00230760 | UBX DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00230770 | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN |
| SKAU_T00230780 | |
| SKAU_T00230790 | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT |
| SKAU_T00230800 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| SKAU_T00230810 | CYCLIN |
| SKAU_T00230820 | 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE |
| SKAU_T00230830 | TRANSMEMBRANE PROTEIN 163 |
| SKAU_T00230840 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00230850 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00230860 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00230870 | ENDONUCLEASE-RELATED |
| SKAU_T00230880 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00230890 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00230900 | TYROSINE-PROTEIN PHOSPHATASE |
| SKAU_T00230910 | |
| SKAU_T00230920 | |
| SKAU_T00230930 | 4.1 G PROTEIN |
| SKAU_T00230940 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00230950 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
| SKAU_T00230960 | TGF-BETA FAMILY |
| SKAU_T00230970 | |
| SKAU_T00230980 | |
| SKAU_T00230990 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| SKAU_T00231000 |
