Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00228010 | RHO-TYPE GTPASE ACTIVATING PROTEIN |
| SKAU_T00228020 | RHO-TYPE GTPASE ACTIVATING PROTEIN |
| SKAU_T00228030 | GOLGI MEMBRANE PROTEIN YIP1 |
| SKAU_T00228040 | KNIRPS-RELATED PROTEIN-RELATED |
| SKAU_T00228050 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00228060 | MERLIN/MOESIN/EZRIN/RADIXIN |
| SKAU_T00228070 | N4BP1-RELATED |
| SKAU_T00228080 | CHLORIDE CHANNEL PROTEIN |
| SKAU_T00228090 | |
| SKAU_T00228100 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| SKAU_T00228110 | CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML |
| SKAU_T00228120 | UPF0461 PROTEIN C5ORF24 |
| SKAU_T00228130 | PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE |
| SKAU_T00228140 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| SKAU_T00228150 | LUPUS LA PROTEIN-RELATED |
| SKAU_T00228160 | SAP30 |
| SKAU_T00228170 | |
| SKAU_T00228180 | SARCOGLYCAN |
| SKAU_T00228190 | VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1 |
| SKAU_T00228200 | CORTACTIN AND DREBRIN |
| SKAU_T00228210 | |
| SKAU_T00228220 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00228230 | |
| SKAU_T00228240 | SET DOMAIN PROTEINS |
| SKAU_T00228250 | SET DOMAIN PROTEINS |
| SKAU_T00228260 | - |
| SKAU_T00228270 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
| SKAU_T00228280 | NEDD4-BINDING PROTEIN 3 |
| SKAU_T00228290 | PLATELET-DERIVED GROWTH FACTOR RECEPTOR LIKE |
| SKAU_T00228300 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| SKAU_T00228310 | ANNEXIN |
| SKAU_T00228320 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
| SKAU_T00228330 | |
| SKAU_T00228340 | SMALL INTEGRAL MEMBRANE PROTEIN 3 |
| SKAU_T00228350 | DYNACTIN P62 SUBUNIT |
| SKAU_T00228360 | |
| SKAU_T00228370 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00228380 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| SKAU_T00228390 | |
| SKAU_T00228400 | PUTATIVE-RELATED |
| SKAU_T00228410 | |
| SKAU_T00228420 | TETRASPANIN |
| SKAU_T00228430 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00228440 | |
| SKAU_T00228450 | ALPHA CATENIN |
| SKAU_T00228460 | |
| SKAU_T00228470 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00228480 | |
| SKAU_T00228490 | PANTOTHENATE KINASE |
| SKAU_T00228500 | TRANSPOSABLE ELEMENT-RELATED |
