Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00225010 | TUBULIN |
| SKAU_T00225020 | |
| SKAU_T00225030 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00225040 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00225050 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00225060 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00225070 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00225080 | LEPRECAN 1 |
| SKAU_T00225090 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
| SKAU_T00225100 | CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3 |
| SKAU_T00225110 | PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5 |
| SKAU_T00225120 | CALSYNTENIN |
| SKAU_T00225130 | TRIOSEPHOSPHATE ISOMERASE |
| SKAU_T00225140 | ATROPHIN-RELATED |
| SKAU_T00225150 | |
| SKAU_T00225160 | |
| SKAU_T00225170 | ENOLASE |
| SKAU_T00225180 | RHO FAMILY GTPASE |
| SKAU_T00225190 | WNT RELATED |
| SKAU_T00225200 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| SKAU_T00225210 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| SKAU_T00225220 | TYROSINE-PROTEIN PHOSPHATASE CORKSCREW |
| SKAU_T00225230 | FATTY ACID BINDING PROTEIN |
| SKAU_T00225240 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| SKAU_T00225250 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5 |
| SKAU_T00225260 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| SKAU_T00225270 | TAPASIN |
| SKAU_T00225280 | SYNAPTOBREVIN FAMILY MEMBER |
| SKAU_T00225290 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51 |
| SKAU_T00225300 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00225310 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7 |
| SKAU_T00225320 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 1A |
| SKAU_T00225330 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5 |
| SKAU_T00225340 | |
| SKAU_T00225350 | |
| SKAU_T00225360 | 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FAMILY MEMBER |
| SKAU_T00225370 | |
| SKAU_T00225380 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| SKAU_T00225390 | C-TYPE NATRIURETIC PEPTIDE |
| SKAU_T00225400 | CONDENSIN |
| SKAU_T00225410 | INHIBITOR OF GROWTH PROTEIN |
| SKAU_T00225420 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| SKAU_T00225430 | NEP1/MRA1 |
| SKAU_T00225440 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| SKAU_T00225450 | ZYXIN/TRIP6 |
| SKAU_T00225460 | PROTEIN FAM131B-RELATED |
| SKAU_T00225470 | PROTEIN FAM131B-RELATED |
| SKAU_T00225480 | CHLORIDE CHANNEL PROTEIN 2 |
| SKAU_T00225490 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| SKAU_T00225500 | RAP GTPASE-ACTIVATING PROTEIN |
