About Synaphobranchus kaupii

Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Synaphobranchus kaupiiChordataKaup's arrowtooth eelDeep sea967Southwest of Taiwan (22°17.466N 119°59.652 E)118154

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
SKAU_1.11.5GbChromosome2023JAINUF01GenoFish - INRAE (Fish Physiology and Genomics laboratory)PRJNA74350397.90%43,073

References
TitleJournalPubmed ID
Genome structures resolve the early diversification of teleost fishesScience36758078

Gene Information

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Gene IDDescription
SKAU_T00222510SYNAPTOTAGMIN
SKAU_T00222520SMAD
SKAU_T00222530INTERLEUKIN ENHANCER-BINDING FACTOR
SKAU_T00222540
SKAU_T00222550INTEGRATOR COMPLEX SUBUNIT 3
SKAU_T00222560YY1 ASSOCIATED PROTEIN-RELATED
SKAU_T00222570YY1 ASSOCIATED PROTEIN-RELATED
SKAU_T00222580ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
SKAU_T00222590ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
SKAU_T00222600
SKAU_T00222610TRANSMEMBRANE PROTEIN 79
SKAU_T00222620TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT
SKAU_T00222630
SKAU_T00222640SERINE/THREONINE-PROTEIN KINASE 17
SKAU_T00222650AGAP007712-PA
SKAU_T00222660ANNEXIN
SKAU_T00222670
SKAU_T00222680TROPOMYOSIN
SKAU_T00222690PHOSPHOMEVALONATE KINASE
SKAU_T00222700REVERSE TRANSCRIPTASES
SKAU_T00222710
SKAU_T00222720
SKAU_T00222730C1ORF189
SKAU_T00222740ACYL-COENZYME A THIOESTERASE THEM4
SKAU_T00222750NUCLEAR HORMONE RECEPTOR HR3-RELATED
SKAU_T00222760EXTRACELLULAR MATRIX PROTEIN 1
SKAU_T00222770PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
SKAU_T0022278026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4
SKAU_T00222790ZINC FINGER PROTEIN 532-RELATED
SKAU_T00222800STEREOCILIN RELATED
SKAU_T00222810RIIA DOMAIN-CONTAINING PROTEIN 1
SKAU_T00222820SCC1 / RAD21 FAMILY MEMBER
SKAU_T00222830CYTOKINE RECEPTOR
SKAU_T00222840PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
SKAU_T00222850PRO-INTERLEUKIN-16
SKAU_T00222860UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER
SKAU_T00222870NICE-3
SKAU_T00222880GDOWN1
SKAU_T00222890PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
SKAU_T00222900CINGULIN-LIKE PROTEIN 1-RELATED
SKAU_T00222910CINGULIN-LIKE PROTEIN 1-RELATED
SKAU_T00222920
SKAU_T00222930RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
SKAU_T00222940
SKAU_T00222950ETS
SKAU_T00222960RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
SKAU_T00222970RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
SKAU_T00222980B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN
SKAU_T00222990TRIACYLGLYCEROL LIPASE
SKAU_T00223000ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
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