Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00224010 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00224020 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00224030 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00224040 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29 |
| SKAU_T00224050 | GLUCOSYLCERAMIDASE |
| SKAU_T00224060 | E3 UBIQUITIN-PROTEIN LIGASE PRAJA |
| SKAU_T00224070 | RNA POLYMERASE III DNA DIRECTED -RELATED |
| SKAU_T00224080 | INTEGRIN ALPHA |
| SKAU_T00224090 | |
| SKAU_T00224100 | INTEGRIN ALPHA |
| SKAU_T00224110 | FATTY ACID BINDING PROTEIN |
| SKAU_T00224120 | CARBONIC ANHYDRASE |
| SKAU_T00224130 | CIRCADIAN-ASSOCIATED TRANSCRIPTIONAL REPRESSOR |
| SKAU_T00224140 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED |
| SKAU_T00224150 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| SKAU_T00224160 | |
| SKAU_T00224170 | |
| SKAU_T00224180 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00224190 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00224200 | RNA BINDING PROTEIN |
| SKAU_T00224210 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
| SKAU_T00224220 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| SKAU_T00224230 | HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS |
| SKAU_T00224240 | |
| SKAU_T00224250 | |
| SKAU_T00224260 | |
| SKAU_T00224270 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00224280 | |
| SKAU_T00224290 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| SKAU_T00224300 | COMPLEXIN |
| SKAU_T00224310 | - |
| SKAU_T00224320 | PYRUVATE KINASE |
| SKAU_T00224330 | I[[H]] CHANNEL, ISOFORM E |
| SKAU_T00224340 | |
| SKAU_T00224350 | AGAP004733-PA |
| SKAU_T00224360 | NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 |
| SKAU_T00224370 | BLOM7 |
| SKAU_T00224380 | AGAP001331-PA-RELATED |
| SKAU_T00224390 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00224400 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00224410 | |
| SKAU_T00224420 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| SKAU_T00224430 | 60S RIBOSOMAL PROTEIN L18 |
| SKAU_T00224440 | SPHINGOSINE KINASE |
| SKAU_T00224450 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00224460 | AGAP001331-PA-RELATED |
| SKAU_T00224470 | PENTRAXIN |
| SKAU_T00224480 | |
| SKAU_T00224490 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| SKAU_T00224500 | NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 3 |
