Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00224510 | TCF3 FUSION PARTNER |
| SKAU_T00224520 | CCR4 NOT-RELATED |
| SKAU_T00224530 | PRE-MRNA SPLICING FACTOR PRP31 |
| SKAU_T00224540 | SERINE/THREONINE-PROTEIN KINASE LMTK1 |
| SKAU_T00224550 | LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1 |
| SKAU_T00224560 | TRANSMEMBRANE CHANNEL-RELATED |
| SKAU_T00224570 | PORCUPINE |
| SKAU_T00224580 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| SKAU_T00224590 | ZINC FINGER PROTEIN |
| SKAU_T00224600 | 30S 40S RIBOSOMAL PROTEIN |
| SKAU_T00224610 | ATAXIN 2-BINDING PROTEIN 1-RELATED |
| SKAU_T00224620 | |
| SKAU_T00224630 | 80 KDA MCM3-ASSOCIATED PROTEIN |
| SKAU_T00224640 | ENDONUCLEASE-RELATED |
| SKAU_T00224650 | CDC42 EFFECTOR PROTEIN BORG |
| SKAU_T00224660 | GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1 |
| SKAU_T00224670 | |
| SKAU_T00224680 | |
| SKAU_T00224690 | FOLLICULIN FAMILY MEMBER |
| SKAU_T00224700 | LEUKOCYTE RECEPTOR CLUSTER MEMBER 9 |
| SKAU_T00224710 | RNA 2',3'-CYCLIC PHOSPHODIESTERASE |
| SKAU_T00224720 | TWEETY-RELATED |
| SKAU_T00224730 | JOSEPHIN 1, 2 |
| SKAU_T00224740 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00224750 | PROTEIN SHISA-9-RELATED |
| SKAU_T00224760 | ZINC FINGER PROTEIN |
| SKAU_T00224770 | THYROTROPH EMBRYONIC FACTOR RELATED |
| SKAU_T00224780 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| SKAU_T00224790 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00224800 | |
| SKAU_T00224810 | PHOSPHATIDYLINOSITOL TRANSFER PROTEIN |
| SKAU_T00224820 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00224830 | |
| SKAU_T00224840 | |
| SKAU_T00224850 | |
| SKAU_T00224860 | - |
| SKAU_T00224870 | DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00224880 | PRENYLATED RAB ACCEPTOR 1-RELATED |
| SKAU_T00224890 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| SKAU_T00224900 | |
| SKAU_T00224910 | |
| SKAU_T00224920 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00224930 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00224940 | VALYL-TRNA SYNTHETASES |
| SKAU_T00224950 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00224960 | |
| SKAU_T00224970 | PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN |
| SKAU_T00224980 | TUBULIN |
| SKAU_T00224990 | FLOTILLIN-RELATED |
| SKAU_T00225000 | FLOTILLIN-RELATED |
