Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00223510 | APOLIPOPROTEIN |
| SKAU_T00223520 | APOLIPOPROTEIN |
| SKAU_T00223530 | APOLIPOPROTEIN |
| SKAU_T00223540 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| SKAU_T00223550 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 |
| SKAU_T00223560 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
| SKAU_T00223570 | |
| SKAU_T00223580 | |
| SKAU_T00223590 | |
| SKAU_T00223600 | ZNF44 PROTEIN |
| SKAU_T00223610 | ZINC FINGER PROTEIN 142 |
| SKAU_T00223620 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
| SKAU_T00223630 | |
| SKAU_T00223640 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| SKAU_T00223650 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| SKAU_T00223660 | |
| SKAU_T00223670 | |
| SKAU_T00223680 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| SKAU_T00223690 | |
| SKAU_T00223700 | |
| SKAU_T00223710 | POU DOMAIN |
| SKAU_T00223720 | HEAVYWEIGHT, ISOFORM A |
| SKAU_T00223730 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00223740 | S100 CALCIUM-BINDING PROTEIN |
| SKAU_T00223750 | |
| SKAU_T00223760 | S100 CALCIUM-BINDING PROTEIN |
| SKAU_T00223770 | CELL CYCLE PROGRESSION PROTEIN 1 |
| SKAU_T00223780 | SHC TRANSFORMING PROTEIN |
| SKAU_T00223790 | FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE |
| SKAU_T00223800 | EPHRIN |
| SKAU_T00223810 | |
| SKAU_T00223820 | EPHRIN |
| SKAU_T00223830 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3 |
| SKAU_T00223840 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00223850 | KERATINOCYTE-ASSOCIATED PROTEIN 2 |
| SKAU_T00223860 | S100 CALCIUM-BINDING PROTEIN |
| SKAU_T00223870 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00223880 | S100 CALCIUM-BINDING PROTEIN |
| SKAU_T00223890 | S100 CALCIUM-BINDING PROTEIN |
| SKAU_T00223900 | SORTING NEXIN 17 AND 27 |
| SKAU_T00223910 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00223920 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| SKAU_T00223930 | |
| SKAU_T00223940 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| SKAU_T00223950 | |
| SKAU_T00223960 | 40S RIBOSOMAL PROTEIN S27 |
| SKAU_T00223970 | LD44762P |
| SKAU_T00223980 | GAMMA-SECRETASE SUBUNIT APH-1 |
| SKAU_T00223990 | PROTEIN FAM189A |
| SKAU_T00224000 | FARNESYL-PYROPHOSPHATE SYNTHETASE |
