Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00220510 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00220520 | SERINE/THREONINE-PROTEIN KINASE NEK |
| SKAU_T00220530 | SEPTIN |
| SKAU_T00220540 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00220550 | - |
| SKAU_T00220560 | TACHYKININ |
| SKAU_T00220570 | SI:DKEY-256H2.1 |
| SKAU_T00220580 | BETA1,3-GALACTOSYLTRANSFERASE |
| SKAU_T00220590 | COLLAGEN ALPHA |
| SKAU_T00220600 | WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBER |
| SKAU_T00220610 | AGAP011572-PA |
| SKAU_T00220620 | ISLET CELL AUTOANTIGEN 1 |
| SKAU_T00220630 | NEUREXOPHILIN |
| SKAU_T00220640 | |
| SKAU_T00220650 | |
| SKAU_T00220660 | SPONDIN |
| SKAU_T00220670 | |
| SKAU_T00220680 | TRANSMEMBRANE PROTEIN 106B |
| SKAU_T00220690 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| SKAU_T00220700 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| SKAU_T00220710 | |
| SKAU_T00220720 | VILLIN |
| SKAU_T00220730 | ADP RIBOSYLATION FACTOR-RELATED |
| SKAU_T00220740 | ETS |
| SKAU_T00220750 | DIACYLGLYCEROL KINASE |
| SKAU_T00220760 | STEROL DESATURASE-RELATED PROTEIN |
| SKAU_T00220770 | |
| SKAU_T00220780 | HOMEOBOX PROTEIN MOX |
| SKAU_T00220790 | |
| SKAU_T00220800 | D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE |
| SKAU_T00220810 | SCLEROSTIN-RELATED |
| SKAU_T00220820 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72 |
| SKAU_T00220830 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00220840 | TETRASPANIN |
| SKAU_T00220850 | ANTERIOR GRADIENT PROTEIN-RELATED |
| SKAU_T00220860 | SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED |
| SKAU_T00220870 | RIKEN CDNA 2310061I04 GENE |
| SKAU_T00220880 | LARGE PROLINE-RICH PROTEIN BAG6 |
| SKAU_T00220890 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| SKAU_T00220900 | GABA-B RECEPTOR |
| SKAU_T00220910 | SH3 DOMAIN-BINDING PROTEIN 5 |
| SKAU_T00220920 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00220930 | |
| SKAU_T00220940 | ATP-DEPENDENT RNA HELICASE |
| SKAU_T00220950 | TON-B BOX DOMAIN |
| SKAU_T00220960 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| SKAU_T00220970 | |
| SKAU_T00220980 | MYOMEGALIN |
| SKAU_T00220990 | COILED-COIL DOMAIN-CONTAINING PROTEIN 105 |
| SKAU_T00221000 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
