Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00220010 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
| SKAU_T00220020 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
| SKAU_T00220030 | COLLAGEN ALPHA |
| SKAU_T00220040 | 2-HYDROXYACYL-COA LYASE |
| SKAU_T00220050 | ANKYRIN REPEAT CONTAINING |
| SKAU_T00220060 | |
| SKAU_T00220070 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| SKAU_T00220080 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00220090 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| SKAU_T00220100 | SKICH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00220110 | 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED |
| SKAU_T00220120 | |
| SKAU_T00220130 | SEGMENTATION PROTEIN FUSHI TARAZU-LIKE PROTEIN |
| SKAU_T00220140 | HOMEOBOX PROTEIN HOX-A11-RELATED |
| SKAU_T00220150 | HOMEOBOX PROTEIN ABDOMINAL-B |
| SKAU_T00220160 | AGAP004664-PA |
| SKAU_T00220170 | PROTEIN ZERKNUELLT 1-RELATED |
| SKAU_T00220180 | SRC-ASSOCIATED ADAPTOR PROTEIN |
| SKAU_T00220190 | |
| SKAU_T00220200 | |
| SKAU_T00220210 | PX DOMAIN-CONTAINING PROTEIN |
| SKAU_T00220220 | CHROMOBOX PROTEIN |
| SKAU_T00220230 | |
| SKAU_T00220240 | |
| SKAU_T00220250 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00220260 | C5ORF31 |
| SKAU_T00220270 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00220280 | |
| SKAU_T00220290 | NONSYNDROMIC HEARING IMPAIRMENT PROTEIN |
| SKAU_T00220300 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| SKAU_T00220310 | NEUROPEPTIDE Y/PANCREATIC HORMONE/PEPTIDE YY |
| SKAU_T00220320 | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED |
| SKAU_T00220330 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| SKAU_T00220340 | |
| SKAU_T00220350 | IOJAP SUPERFAMILY ORTHOLOG |
| SKAU_T00220360 | VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED |
| SKAU_T00220370 | RAFTLIN-RELATED |
| SKAU_T00220380 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| SKAU_T00220390 | DNA-BINDING PROTEIN SATB FAMILY MEMBER |
| SKAU_T00220400 | M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL |
| SKAU_T00220410 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
| SKAU_T00220420 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
| SKAU_T00220430 | - |
| SKAU_T00220440 | DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN |
| SKAU_T00220450 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00220460 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00220470 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00220480 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00220490 | |
| SKAU_T00220500 |
