Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00227010 | |
| SKAU_T00227020 | MULTIPLE PDZ DOMAIN PROTEIN |
| SKAU_T00227030 | CYSTEINE-RICH HYDROPHOBIC DOMAIN PROTEIN BRAIN X-LINKED PROTEIN |
| SKAU_T00227040 | HOMEOBOX PROTEIN CDX |
| SKAU_T00227050 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00227060 | TESTIS EXPRESSED 11 |
| SKAU_T00227070 | DISCS LARGE |
| SKAU_T00227080 | |
| SKAU_T00227090 | |
| SKAU_T00227100 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
| SKAU_T00227110 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00227120 | PROTEIN LIN-7 HOMOLOG |
| SKAU_T00227130 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| SKAU_T00227140 | RAS-RELATED PROTEIN RAB |
| SKAU_T00227150 | |
| SKAU_T00227160 | SH2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00227170 | |
| SKAU_T00227180 | |
| SKAU_T00227190 | |
| SKAU_T00227200 | |
| SKAU_T00227210 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| SKAU_T00227220 | |
| SKAU_T00227230 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| SKAU_T00227240 | COAGULATION FACTOR |
| SKAU_T00227250 | |
| SKAU_T00227260 | |
| SKAU_T00227270 | FIBROBLAST GROWTH FACTOR |
| SKAU_T00227280 | |
| SKAU_T00227290 | |
| SKAU_T00227300 | |
| SKAU_T00227310 | STEROL DESATURASE |
| SKAU_T00227320 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00227330 | |
| SKAU_T00227340 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| SKAU_T00227350 | MICROTUBULE-ASSOCIATED PROTEIN |
| SKAU_T00227360 | FOUR AND A HALF LIM DOMAINS PROTEIN 1 |
| SKAU_T00227370 | SODIUM/HYDROGEN EXCHANGER |
| SKAU_T00227380 | - |
| SKAU_T00227390 | DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED |
| SKAU_T00227400 | |
| SKAU_T00227410 | FAM124 DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00227420 | UNCHARACTERIZED |
| SKAU_T00227430 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
| SKAU_T00227440 | PHD FINGER PROTEIN |
| SKAU_T00227450 | CALCIUM-BINDING PROTEIN 39-RELATED |
| SKAU_T00227460 | COILED-COIL DOMAIN-CONTAINING PROTEIN 160 |
| SKAU_T00227470 | GLYPICAN |
| SKAU_T00227480 | GLYPICAN |
| SKAU_T00227490 | GLYPICAN |
| SKAU_T00227500 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
