Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00231510 | ZINC FINGER PROTEIN RLF |
| SKAU_T00231520 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00231530 | POU DOMAIN |
| SKAU_T00231540 | CHARGED MULTIVESICULAR BODY PROTEIN |
| SKAU_T00231550 | TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN |
| SKAU_T00231560 | TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED |
| SKAU_T00231570 | GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 |
| SKAU_T00231580 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00231590 | |
| SKAU_T00231600 | TSC22 DOMAIN FAMILY PROTEIN 1 |
| SKAU_T00231610 | |
| SKAU_T00231620 | TSC22 DOMAIN FAMILY PROTEIN 1 |
| SKAU_T00231630 | |
| SKAU_T00231640 | |
| SKAU_T00231650 | ECTO-NOX DISULFIDE-THIOL EXCHANGER |
| SKAU_T00231660 | PROTEIN CBG26694 |
| SKAU_T00231670 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| SKAU_T00231680 | A KINASE ANCHOR PROTEIN |
| SKAU_T00231690 | |
| SKAU_T00231700 | DIACYLGLYCEROL KINASE |
| SKAU_T00231710 | |
| SKAU_T00231720 | |
| SKAU_T00231730 | REGULATOR OF CELL CYCLE RGCC |
| SKAU_T00231740 | - |
| SKAU_T00231750 | PRE-MRNA-PROCESSING PROTEIN PRP40 |
| SKAU_T00231760 | UNCHARACTERIZED |
| SKAU_T00231770 | ES1 PROTEIN HOMOLOG, MITOCHONDRIAL |
| SKAU_T00231780 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00231790 | LIM DOMAIN ONLY PROTEIN 7 |
| SKAU_T00231800 | LIM DOMAIN ONLY PROTEIN 7 |
| SKAU_T00231810 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00231820 | DACHSHUND |
| SKAU_T00231830 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| SKAU_T00231840 | |
| SKAU_T00231850 | ZINC FINGER PROTEIN ZIC AND GLI |
| SKAU_T00231860 | ZINC FINGER PROTEIN ZIC AND GLI |
| SKAU_T00231870 | |
| SKAU_T00231880 | |
| SKAU_T00231890 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00231900 | |
| SKAU_T00231910 | PHOSPHOLIPASE D |
| SKAU_T00231920 | |
| SKAU_T00231930 | |
| SKAU_T00231940 | SI:CH211-243P7.3-RELATED |
| SKAU_T00231950 | |
| SKAU_T00231960 | |
| SKAU_T00231970 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00231980 | |
| SKAU_T00231990 | |
| SKAU_T00232000 |
