About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8810.20321CUTICLE PROTEIN
mRNA.BJAM.scaffold8810.20322
mRNA.BJAM.scaffold8810.20323
mRNA.BJAM.scaffold8811.20324
mRNA.BJAM.scaffold8814.20325
mRNA.BJAM.scaffold8814.20326
mRNA.BJAM.scaffold8816.20327
mRNA.BJAM.scaffold8819.20328SIDESTEP PROTEIN
mRNA.BJAM.scaffold8819.20329SIDESTEP PROTEIN
mRNA.BJAM.scaffold8821.20330
mRNA.BJAM.scaffold8822.20331ARRESTIN DOMAIN-CONTAINING PROTEIN D
mRNA.BJAM.scaffold8822.20332BLUE CHEESE
mRNA.BJAM.scaffold8822.20333BLUE CHEESE
mRNA.BJAM.scaffold8822.20334BLUE CHEESE
mRNA.BJAM.scaffold8822.20335BLUE CHEESE
mRNA.BJAM.scaffold8822.20336BLUE CHEESE
mRNA.BJAM.scaffold8823.20337MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
mRNA.BJAM.scaffold8826.20339CADHERIN-87A
mRNA.BJAM.scaffold8829.20340
mRNA.BJAM.scaffold883.5605
mRNA.BJAM.scaffold883.5606
mRNA.BJAM.scaffold883.5607TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold883.5608
mRNA.BJAM.scaffold8831.20341KELCH DOMAIN-CONTAINING PROTEIN 10
mRNA.BJAM.scaffold8831.20342
mRNA.BJAM.scaffold8832.20343NEUROLIGIN
mRNA.BJAM.scaffold8832.20344NEUROLIGIN
mRNA.BJAM.scaffold8835.20345CENTAURIN-GAMMA-1A
mRNA.BJAM.scaffold8837.20346DYNACTIN 1-RELATED MICROTUBULE-BINDING
mRNA.BJAM.scaffold8838.20347
mRNA.BJAM.scaffold884.5609PHOSPHOLIPASE D
mRNA.BJAM.scaffold884.5610
mRNA.BJAM.scaffold884.5611RIKEN CDNA 9930021J03 GENE
mRNA.BJAM.scaffold884.5612HL01030P-RELATED
mRNA.BJAM.scaffold884.5613POLYCOMB GROUP PROTEIN
mRNA.BJAM.scaffold884.5614SERINE/ARGININE RICH SPLICING FACTOR
mRNA.BJAM.scaffold884.5615
mRNA.BJAM.scaffold884.5616
mRNA.BJAM.scaffold8845.20348SAL-LIKE PROTEIN
mRNA.BJAM.scaffold8846.20349MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
mRNA.BJAM.scaffold8847.20350DNA HELICASE-RELATED
mRNA.BJAM.scaffold885.5617MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
mRNA.BJAM.scaffold885.5618ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold885.5619
mRNA.BJAM.scaffold885.5620ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold885.5621
mRNA.BJAM.scaffold885.5622GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED
mRNA.BJAM.scaffold885.5623RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold8850.20351
mRNA.BJAM.scaffold8851.20352NEUROLIGIN
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