About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8606.20201ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.scaffold8608.20202
mRNA.BJAM.scaffold8609.20203ZINC FINGER PROTEIN
mRNA.BJAM.scaffold861.5520CHITIN BINDING PERITROPHIN-A
mRNA.BJAM.scaffold861.5521
mRNA.BJAM.scaffold861.5522
mRNA.BJAM.scaffold861.5523
mRNA.BJAM.scaffold861.5524CHITIN BINDING PERITROPHIN-A
mRNA.BJAM.scaffold861.5525CHITIN BINDING PERITROPHIN-A
mRNA.BJAM.scaffold8613.20204FI04487P
mRNA.BJAM.scaffold8614.20205
mRNA.BJAM.scaffold8614.20206
mRNA.BJAM.scaffold8617.20207FUKUTIN RELATED PROTEIN
mRNA.BJAM.scaffold8618.20208
mRNA.BJAM.scaffold862.5526
mRNA.BJAM.scaffold862.5527
mRNA.BJAM.scaffold862.5528
mRNA.BJAM.scaffold8629.20211
mRNA.BJAM.scaffold863.5529
mRNA.BJAM.scaffold863.5530CDC42 EFFECTOR PROTEIN BORG
mRNA.BJAM.scaffold863.5531TYROSINE-PROTEIN KINASE
mRNA.BJAM.scaffold863.5532TYROSINE-PROTEIN KINASE BAZ1B
mRNA.BJAM.scaffold863.5533TYROSINE-PROTEIN KINASE BAZ1B
mRNA.BJAM.scaffold863.5534
mRNA.BJAM.scaffold863.5535HSC70CB, ISOFORM G-RELATED
mRNA.BJAM.scaffold863.5536DNA-DIRECTED RNA POLYMERASE I,II,III
mRNA.BJAM.scaffold863.5537UNCHARACTERIZED
mRNA.BJAM.scaffold863.5538
mRNA.BJAM.scaffold863.5539
mRNA.BJAM.scaffold863.5540NF-E2 INDUCIBLE PROTEIN
mRNA.BJAM.scaffold863.5541NF-E2 INDUCIBLE PROTEIN
mRNA.BJAM.scaffold8630.20212
mRNA.BJAM.scaffold8631.2021339S RIBOSOMAL PROTEIN L43
mRNA.BJAM.scaffold8632.20214ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
mRNA.BJAM.scaffold8632.20215
mRNA.BJAM.scaffold8638.20216MALONATE-SEMIALDEHYDE DEHYDROGENASE
mRNA.BJAM.scaffold8639.20217
mRNA.BJAM.scaffold8639.20218POLYPHOSPHOINOSITIDE PHOSPHATASE
mRNA.BJAM.scaffold8645.20219
mRNA.BJAM.scaffold8645.20220CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
mRNA.BJAM.scaffold8645.20221CADHERIN-23
mRNA.BJAM.scaffold8646.20222INACTIVE TYROSINE-PROTEIN KINASE 7
mRNA.BJAM.scaffold8646.20223RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold865.5542CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold8650.20224
mRNA.BJAM.scaffold8652.20225MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
mRNA.BJAM.scaffold8652.20226
mRNA.BJAM.scaffold8659.20227ARRESTIN
mRNA.BJAM.scaffold8662.20228DYNEIN HEAVY CHAIN FAMILY PROTEIN
mRNA.BJAM.scaffold8662.20229ANGIOTENSIN-CONVERTING ENZYME
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