About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold852.5478CALPAIN
mRNA.BJAM.scaffold852.5479SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
mRNA.BJAM.scaffold852.5480MKRN2 OPPOSITE STRAND PROTEIN
mRNA.BJAM.scaffold852.5481BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
mRNA.BJAM.scaffold852.5482TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
mRNA.BJAM.scaffold852.5483GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
mRNA.BJAM.scaffold852.5484
mRNA.BJAM.scaffold852.5485SCHWANNOMIN INTERACTING PROTEIN 1
mRNA.BJAM.scaffold852.5486LD41958P
mRNA.BJAM.scaffold8521.20141
mRNA.BJAM.scaffold8521.20142
mRNA.BJAM.scaffold8522.20143AGAP008170-PA
mRNA.BJAM.scaffold8527.20144METALLOPROTEASE TLDD
mRNA.BJAM.scaffold8527.20145
mRNA.BJAM.scaffold8528.20146
mRNA.BJAM.scaffold8528.20147LYSOSOMAL ACID LIPASE-RELATED
mRNA.BJAM.scaffold853.5487ELKS/RAB6-INTERACTING/CAST PROTEIN
mRNA.BJAM.scaffold853.5488ELKS/RAB6-INTERACTING/CAST PROTEIN
mRNA.BJAM.scaffold853.5489UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49
mRNA.BJAM.scaffold853.5490-
mRNA.BJAM.scaffold8530.20148
mRNA.BJAM.scaffold8533.20149
mRNA.BJAM.scaffold8534.20150
mRNA.BJAM.scaffold8535.20151CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT
mRNA.BJAM.scaffold8536.20152PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
mRNA.BJAM.scaffold854.5491
mRNA.BJAM.scaffold854.5492
mRNA.BJAM.scaffold854.5493DISCS LARGE
mRNA.BJAM.scaffold854.5494DISCS LARGE
mRNA.BJAM.scaffold854.5495SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold854.5496-
mRNA.BJAM.scaffold854.5497SULFOTRANSFERASE SULT
mRNA.BJAM.scaffold854.5498-
mRNA.BJAM.scaffold8540.20155RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold8541.20156
mRNA.BJAM.scaffold8541.20157CYTOSOLIC CARBOXYPEPTIDASE
mRNA.BJAM.scaffold8544.20158
mRNA.BJAM.scaffold8545.20159NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold8545.20160PECANEX
mRNA.BJAM.scaffold8545.20161
mRNA.BJAM.scaffold8552.20162
mRNA.BJAM.scaffold8552.20163SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold8554.20164
mRNA.BJAM.scaffold8554.20165DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold8555.20166PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
mRNA.BJAM.scaffold856.5499
mRNA.BJAM.scaffold856.5500
mRNA.BJAM.scaffold856.5501
mRNA.BJAM.scaffold8560.20167
mRNA.BJAM.scaffold8560.20168
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