About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8302.19980
mRNA.BJAM.scaffold8302.19981
mRNA.BJAM.scaffold8306.19982TRANSCRIPTION ELONGATION FACTOR SPT6
mRNA.BJAM.scaffold831.5356N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
mRNA.BJAM.scaffold831.5357N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
mRNA.BJAM.scaffold831.5358N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
mRNA.BJAM.scaffold831.5359N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
mRNA.BJAM.scaffold831.5360
mRNA.BJAM.scaffold831.5361
mRNA.BJAM.scaffold831.5362
mRNA.BJAM.scaffold831.5363CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2
mRNA.BJAM.scaffold831.5364RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN
mRNA.BJAM.scaffold831.5365RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN
mRNA.BJAM.scaffold831.5366DRAB5-RELATED
mRNA.BJAM.scaffold8310.19983
mRNA.BJAM.scaffold8310.19984LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold8310.19985SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold8310.19986HEAT SHOCK PROTEIN HSP-12.2-RELATED
mRNA.BJAM.scaffold832.5367UNCHARACTERIZED
mRNA.BJAM.scaffold832.5368
mRNA.BJAM.scaffold8320.19988
mRNA.BJAM.scaffold8322.19989
mRNA.BJAM.scaffold8324.19990NUCLEAR PORE COMPLEX PROTEIN NUP160
mRNA.BJAM.scaffold8324.19991NUCLEAR PORE COMPLEX PROTEIN NUP160
mRNA.BJAM.scaffold8325.19992SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold8325.19993SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold8325.19994PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN
mRNA.BJAM.scaffold8325.19995MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
mRNA.BJAM.scaffold8326.19996CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold833.5369CYCLIN
mRNA.BJAM.scaffold833.5370AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
mRNA.BJAM.scaffold833.5371
mRNA.BJAM.scaffold8333.19997
mRNA.BJAM.scaffold8333.19998
mRNA.BJAM.scaffold8333.19999DESMOGLEIN FAMILY MEMBER
mRNA.BJAM.scaffold8333.20000
mRNA.BJAM.scaffold8333.20001
mRNA.BJAM.scaffold8334.20002ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold8334.20003
mRNA.BJAM.scaffold8334.20004
mRNA.BJAM.scaffold8334.20005
mRNA.BJAM.scaffold8334.20006ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold8334.20007ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
mRNA.BJAM.scaffold8338.20008
mRNA.BJAM.scaffold8338.20009
mRNA.BJAM.scaffold8339.20010PROTEIN PHOSPHATASE 2C
mRNA.BJAM.scaffold834.5372
mRNA.BJAM.scaffold834.5373
mRNA.BJAM.scaffold8340.20011SERINE/THREONINE-PROTEIN KINASE 17
mRNA.BJAM.scaffold8342.20012
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