About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold81.58340S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11
mRNA.BJAM.scaffold81.584CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
mRNA.BJAM.scaffold81.585CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
mRNA.BJAM.scaffold81.586GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN
mRNA.BJAM.scaffold81.587
mRNA.BJAM.scaffold81.588TROPOMYOSIN
mRNA.BJAM.scaffold81.589MORTALITY FACTOR 4-LIKE PROTEIN
mRNA.BJAM.scaffold81.590
mRNA.BJAM.scaffold81.591
mRNA.BJAM.scaffold81.592TYROSYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold81.593PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
mRNA.BJAM.scaffold81.594PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
mRNA.BJAM.scaffold81.59528S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
mRNA.BJAM.scaffold81.596PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
mRNA.BJAM.scaffold81.597
mRNA.BJAM.scaffold810.5268
mRNA.BJAM.scaffold810.5269
mRNA.BJAM.scaffold810.527060S RIBOSOMAL PROTEIN L11-RELATED
mRNA.BJAM.scaffold8100.19810CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold8101.19811
mRNA.BJAM.scaffold8104.19812
mRNA.BJAM.scaffold8107.19813
mRNA.BJAM.scaffold8107.19814
mRNA.BJAM.scaffold811.5271LEUCOKININ RECEPTOR-RELATED
mRNA.BJAM.scaffold811.5272SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold811.5273
mRNA.BJAM.scaffold811.5274YY1 ASSOCIATED PROTEIN-RELATED
mRNA.BJAM.scaffold811.5275
mRNA.BJAM.scaffold8110.19815UNCHARACTERIZED
mRNA.BJAM.scaffold8110.19816TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR
mRNA.BJAM.scaffold8112.19817ALPHA-MANNOSIDASE 2C1
mRNA.BJAM.scaffold8112.19818ALPHA-MANNOSIDASE 2C1
mRNA.BJAM.scaffold8117.19819HOMEOBOX PROTEIN ENGRAILED
mRNA.BJAM.scaffold8120.19820INOSITOL POLYPHOSPHATE KINASE
mRNA.BJAM.scaffold8121.19821
mRNA.BJAM.scaffold8122.19822SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA
mRNA.BJAM.scaffold8124.19823ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold8124.19824ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold8127.19825PHOSPHOFRUCTOKINASE
mRNA.BJAM.scaffold813.5276
mRNA.BJAM.scaffold813.5277N-ACETYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold813.5278FRUCTOSE-1,6-BISPHOSPHATASE-RELATED
mRNA.BJAM.scaffold813.5279LD33695P
mRNA.BJAM.scaffold813.5280LD33695P
mRNA.BJAM.scaffold813.5281-
mRNA.BJAM.scaffold813.5283
mRNA.BJAM.scaffold813.5284
mRNA.BJAM.scaffold813.5285ZINC FINGER PROTEIN
mRNA.BJAM.scaffold813.5286MERLIN/MOESIN/EZRIN/RADIXIN
mRNA.BJAM.scaffold813.5287-
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