About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold79.570
mRNA.BJAM.scaffold79.571
mRNA.BJAM.scaffold790.5180
mRNA.BJAM.scaffold7900.19657TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold7904.19658
mRNA.BJAM.scaffold7904.19659
mRNA.BJAM.scaffold7906.19660PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
mRNA.BJAM.scaffold7906.19661
mRNA.BJAM.scaffold791.5181
mRNA.BJAM.scaffold791.5182UNCHARACTERIZED
mRNA.BJAM.scaffold791.5183THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11
mRNA.BJAM.scaffold7912.19662GLR0591 PROTEIN
mRNA.BJAM.scaffold7912.19663GLR0591 PROTEIN
mRNA.BJAM.scaffold7912.19664
mRNA.BJAM.scaffold7912.19666GLR0591 PROTEIN
mRNA.BJAM.scaffold7913.19667
mRNA.BJAM.scaffold7915.19668
mRNA.BJAM.scaffold7916.19669
mRNA.BJAM.scaffold7917.19670
mRNA.BJAM.scaffold7918.19671LD11652P
mRNA.BJAM.scaffold7919.19672
mRNA.BJAM.scaffold7919.19673FACIOGENITAL DYSPLASIA PROTEIN
mRNA.BJAM.scaffold7919.19674
mRNA.BJAM.scaffold7919.19675PIKACHURIN-LIKE PROTEIN
mRNA.BJAM.scaffold792.5184MYOSIN REGULATORY LIGHT CHAIN 2
mRNA.BJAM.scaffold792.5185ALCOHOL DEHYDROGENASE RELATED
mRNA.BJAM.scaffold792.5186
mRNA.BJAM.scaffold7921.19676MELANOCYTE PROTEIN PMEL 17-RELATED
mRNA.BJAM.scaffold7921.19677METAXIN RELATED
mRNA.BJAM.scaffold7921.19678ACTIN BUNDLING/MISSING IN METASTASIS-RELATED
mRNA.BJAM.scaffold7924.19679
mRNA.BJAM.scaffold7925.19680TRANSPOSABLE ELEMENT TC3 TRANSPOSASE-LIKE PROTEIN
mRNA.BJAM.scaffold7926.19681LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold7927.19682GAMMA TUBULIN COMPLEX PROTEIN
mRNA.BJAM.scaffold7927.19683
mRNA.BJAM.scaffold7927.19684
mRNA.BJAM.scaffold7927.19685
mRNA.BJAM.scaffold7928.19686METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold793.5187
mRNA.BJAM.scaffold793.5188
mRNA.BJAM.scaffold793.5189
mRNA.BJAM.scaffold7930.19687
mRNA.BJAM.scaffold7933.19688
mRNA.BJAM.scaffold7933.19689
mRNA.BJAM.scaffold7937.19690ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7937.19691ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7937.19692ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7937.19693ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7939.19694CALPAIN
mRNA.BJAM.scaffold7940.19695
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