About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold7821.19596
mRNA.BJAM.scaffold7821.19597
mRNA.BJAM.scaffold7821.19598RAB11-FAMILY INTERACTING PROTEIN
mRNA.BJAM.scaffold7827.19599
mRNA.BJAM.scaffold7828.19600SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold7828.19601SODIUM/CHLORIDE DEPENDENT TRANSPORTER
mRNA.BJAM.scaffold7828.19602
mRNA.BJAM.scaffold783.5146
mRNA.BJAM.scaffold783.5147PLAKOPHILLIN-RELATED
mRNA.BJAM.scaffold783.5148LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN
mRNA.BJAM.scaffold783.5149
mRNA.BJAM.scaffold7832.19603UNCHARACTERIZED
mRNA.BJAM.scaffold7832.19604UNCHARACTERIZED
mRNA.BJAM.scaffold7834.19605
mRNA.BJAM.scaffold7834.19606SMAD
mRNA.BJAM.scaffold7837.19607EG:EG0003.4 PROTEIN-RELATED
mRNA.BJAM.scaffold7837.19608EG:EG0003.4 PROTEIN-RELATED
mRNA.BJAM.scaffold7837.19609
mRNA.BJAM.scaffold7838.19610SOX TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold784.51503-KETODIHYDROSPHINGOSINE REDUCTASE
mRNA.BJAM.scaffold784.5151LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold784.5152UNCHARACTERIZED
mRNA.BJAM.scaffold784.5153VACUOLAR PROTON ATPASES
mRNA.BJAM.scaffold784.5154
mRNA.BJAM.scaffold784.5155
mRNA.BJAM.scaffold784.5156
mRNA.BJAM.scaffold784.5157ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
mRNA.BJAM.scaffold784.5158
mRNA.BJAM.scaffold784.5159
mRNA.BJAM.scaffold784.5160
mRNA.BJAM.scaffold7840.19611
mRNA.BJAM.scaffold7842.19612PROSTAGLANDIN REDUCTASE
mRNA.BJAM.scaffold7845.1961360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
mRNA.BJAM.scaffold7845.19614ACETYL-COA C-ACYLTRANSFERASE
mRNA.BJAM.scaffold7846.19615DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
mRNA.BJAM.scaffold7846.19616DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
mRNA.BJAM.scaffold7846.19617
mRNA.BJAM.scaffold7848.19618LD24721P
mRNA.BJAM.scaffold7848.19619DNAJ HOMOLOG SUBFAMILY C MEMBER 7
mRNA.BJAM.scaffold7848.19620LD24721P
mRNA.BJAM.scaffold7849.19621EG:EG0003.4 PROTEIN-RELATED
mRNA.BJAM.scaffold785.5161COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
mRNA.BJAM.scaffold7854.19622
mRNA.BJAM.scaffold7859.19623BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
mRNA.BJAM.scaffold7859.19624BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
mRNA.BJAM.scaffold786.5162
mRNA.BJAM.scaffold786.5163
mRNA.BJAM.scaffold786.5164EG:EG0003.4 PROTEIN-RELATED
mRNA.BJAM.scaffold7860.19625
mRNA.BJAM.scaffold7860.19626
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