About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold829.5349THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold829.5350CALSYNTENIN
mRNA.BJAM.scaffold829.5351
mRNA.BJAM.scaffold829.5352TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
mRNA.BJAM.scaffold829.5353ASPARTYL/LYSYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold829.5354MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
mRNA.BJAM.scaffold8291.19965
mRNA.BJAM.scaffold8291.19966NUCLEAR PORE COMPLEX PROTEIN NUP133
mRNA.BJAM.scaffold8293.19968SMALL NUCLEAR RIBONUCLEOPROTEIN SM
mRNA.BJAM.scaffold8293.19969NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold8293.19970NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold8293.19971NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold8293.19972NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
mRNA.BJAM.scaffold8294.19973
mRNA.BJAM.scaffold8295.19974
mRNA.BJAM.scaffold8297.19975
mRNA.BJAM.scaffold83.602DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN
mRNA.BJAM.scaffold83.603SET AND MYND DOMAIN CONTAINING, ARTHROPOD-SPECIFIC, MEMBER 4, ISOFORM A
mRNA.BJAM.scaffold83.604SET AND MYND DOMAIN CONTAINING, ARTHROPOD-SPECIFIC, MEMBER 4, ISOFORM A
mRNA.BJAM.scaffold83.605SET AND MYND DOMAIN CONTAINING, ARTHROPOD-SPECIFIC, MEMBER 4, ISOFORM A
mRNA.BJAM.scaffold83.606MYOSIN REGULATORY LIGHT CHAIN 2
mRNA.BJAM.scaffold83.607BLOC-1-RELATED COMPLEX SUBUNIT 5
mRNA.BJAM.scaffold83.608INTRAFLAGELLAR TRANSPORT PROTEIN 122 FAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold83.609PERIOSTIN-RELATED
mRNA.BJAM.scaffold83.610DNA POLYMERASE ZETA CATALYTIC SUBUNIT
mRNA.BJAM.scaffold83.611
mRNA.BJAM.scaffold83.612
mRNA.BJAM.scaffold83.613DNA POLYMERASE ZETA CATALYTIC SUBUNIT
mRNA.BJAM.scaffold83.614
mRNA.BJAM.scaffold83.615DENN DOMAIN-CONTAINING
mRNA.BJAM.scaffold83.616FI14130P
mRNA.BJAM.scaffold83.617FI14130P
mRNA.BJAM.scaffold83.61860S RIBOSOMAL PROTEIN L3-RELATED
mRNA.BJAM.scaffold83.61960S RIBOSOMAL PROTEIN L3-RELATED
mRNA.BJAM.scaffold83.620ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold83.621ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold83.622ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold83.623ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold83.624ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold83.625LIPASE
mRNA.BJAM.scaffold83.626SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold83.627SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold83.628SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold83.629SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold83.630SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold830.5355ZINC FINGER PROTEIN
mRNA.BJAM.scaffold8300.19976CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2
mRNA.BJAM.scaffold8300.19977CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2
mRNA.BJAM.scaffold8300.19978CYTOCHROME P450
mRNA.BJAM.scaffold8300.19979
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