About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8253.1992215-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
mRNA.BJAM.scaffold8253.19923KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY B MEMBER 1
mRNA.BJAM.scaffold8254.19924
mRNA.BJAM.scaffold8255.19925
mRNA.BJAM.scaffold8256.19926OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold8256.19927OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold8256.19928
mRNA.BJAM.scaffold8256.19929
mRNA.BJAM.scaffold8256.19930
mRNA.BJAM.scaffold8257.19931
mRNA.BJAM.scaffold8257.19932OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold826.5342NUCLEAR PROTEIN MDM1
mRNA.BJAM.scaffold826.5343
mRNA.BJAM.scaffold826.5344ANKYRIN REPEAT PROTEIN
mRNA.BJAM.scaffold826.5345
mRNA.BJAM.scaffold8264.19933PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold8264.19934COILED-COIL DOMAIN-CONTAINING 74A
mRNA.BJAM.scaffold8264.19935PANTOTHENATE KINASE
mRNA.BJAM.scaffold8264.19936
mRNA.BJAM.scaffold8268.19937UNCHARACTERIZED
mRNA.BJAM.scaffold827.5346
mRNA.BJAM.scaffold8271.19938ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
mRNA.BJAM.scaffold8271.19939ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
mRNA.BJAM.scaffold8273.19940CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19941CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19942CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19943CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19944CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19945CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19946
mRNA.BJAM.scaffold8273.19947CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8273.19948CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold8274.19949BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
mRNA.BJAM.scaffold8275.19950MICROSOMAL DIPEPTIDASE
mRNA.BJAM.scaffold8276.19951ZINC FINGER PROTEIN
mRNA.BJAM.scaffold8277.19952PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
mRNA.BJAM.scaffold8278.19953ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
mRNA.BJAM.scaffold8278.19954BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold8279.19955UNCHARACTERIZED
mRNA.BJAM.scaffold828.5347TYROSINE-PROTEIN KINASE
mRNA.BJAM.scaffold828.5348
mRNA.BJAM.scaffold8280.19956
mRNA.BJAM.scaffold8280.19957ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold8280.19958
mRNA.BJAM.scaffold8281.19959DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold8283.19960TRANSCRIPTION FACTOR CP2
mRNA.BJAM.scaffold8283.19961
mRNA.BJAM.scaffold8284.19962
mRNA.BJAM.scaffold8287.19963G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold8287.19964AGAP009604-PA
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