About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold838.5401N-ACETYLGALACTOSAMINYLTRANSFERASE
mRNA.BJAM.scaffold838.5402
mRNA.BJAM.scaffold838.5403VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
mRNA.BJAM.scaffold838.5404
mRNA.BJAM.scaffold838.5405EG:80H7.2 PROTEIN
mRNA.BJAM.scaffold8381.20037PRE-MRNA-PROCESSING FACTOR 19
mRNA.BJAM.scaffold8381.20038VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED
mRNA.BJAM.scaffold8382.20039
mRNA.BJAM.scaffold8382.20040
mRNA.BJAM.scaffold8382.20041GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold8383.20042DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold8387.20043SPONDIN
mRNA.BJAM.scaffold8388.20044
mRNA.BJAM.scaffold8388.20045KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold839.5406
mRNA.BJAM.scaffold839.5407
mRNA.BJAM.scaffold839.5408
mRNA.BJAM.scaffold839.5409CONTACTIN 5
mRNA.BJAM.scaffold8390.20046PDZ DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold8390.20047WD-REPEATCONTAINING PROTEIN WDR1
mRNA.BJAM.scaffold8391.20048
mRNA.BJAM.scaffold8392.20049PROTEIN MAX MYC-ASSOCIATED FACTOR X
mRNA.BJAM.scaffold8396.20050ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED
mRNA.BJAM.scaffold8398.20051
mRNA.BJAM.scaffold84.631
mRNA.BJAM.scaffold84.632ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold84.633NICALIN
mRNA.BJAM.scaffold84.634
mRNA.BJAM.scaffold84.635
mRNA.BJAM.scaffold840.5410PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
mRNA.BJAM.scaffold840.5411PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
mRNA.BJAM.scaffold840.5412PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
mRNA.BJAM.scaffold840.5413ALPHA-MANNOSIDASE 2C1
mRNA.BJAM.scaffold840.5414ALPHA-MANNOSIDASE 2C1
mRNA.BJAM.scaffold840.5415ALPHA-MANNOSIDASE 2C1
mRNA.BJAM.scaffold840.5416ACETYL-COA C-ACYLTRANSFERASE
mRNA.BJAM.scaffold840.5417CARBON CATABOLITE REPRESSOR PROTEIN 4
mRNA.BJAM.scaffold840.5418
mRNA.BJAM.scaffold840.5419NF-KAPPA-B INHIBITOR ALPHA
mRNA.BJAM.scaffold8400.20052
mRNA.BJAM.scaffold8404.20053ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold8406.20054DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold841.5420CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold841.5421GLYCINE DEHYDROGENASE, DECARBOXYLATING
mRNA.BJAM.scaffold841.5422GLYCINE DEHYDROGENASE, DECARBOXYLATING
mRNA.BJAM.scaffold841.542314-3-3 PROTEIN
mRNA.BJAM.scaffold841.5424ANTIGEN BSP, PUTATIVE-RELATED
mRNA.BJAM.scaffold841.5425EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
mRNA.BJAM.scaffold841.5426
mRNA.BJAM.scaffold841.5427ZINC FINGER PROTEIN ZIC AND GLI
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