About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8560.20169
mRNA.BJAM.scaffold8565.20170U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT
mRNA.BJAM.scaffold8565.20171
mRNA.BJAM.scaffold857.5502MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
mRNA.BJAM.scaffold857.5503
mRNA.BJAM.scaffold857.5504MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
mRNA.BJAM.scaffold857.5505
mRNA.BJAM.scaffold857.5506
mRNA.BJAM.scaffold857.5507MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
mRNA.BJAM.scaffold857.5508
mRNA.BJAM.scaffold857.5509
mRNA.BJAM.scaffold857.5510
mRNA.BJAM.scaffold857.5511APG9 AUTOPHAGY 9
mRNA.BJAM.scaffold8573.20172BASIGIN RELATED
mRNA.BJAM.scaffold8573.20173TITIN
mRNA.BJAM.scaffold8573.20174PROTEIN SIDEKICK
mRNA.BJAM.scaffold8573.20175NADPH OXIDASE
mRNA.BJAM.scaffold8578.20176E3 UBIQUITIN-PROTEIN LIGASE UBR7
mRNA.BJAM.scaffold8578.20177E3 UBIQUITIN-PROTEIN LIGASE UBR7
mRNA.BJAM.scaffold858.5512
mRNA.BJAM.scaffold858.5513
mRNA.BJAM.scaffold8582.20178
mRNA.BJAM.scaffold8584.20179
mRNA.BJAM.scaffold8586.20180NEUROLIGIN
mRNA.BJAM.scaffold8586.20181NEUROLIGIN
mRNA.BJAM.scaffold8586.20182
mRNA.BJAM.scaffold8587.20183DRAB11-RELATED
mRNA.BJAM.scaffold8587.20184TRANSPOSASE-RELATED
mRNA.BJAM.scaffold8587.20185PROBABLE MEMBRANE PROTEIN DUF221-RELATED
mRNA.BJAM.scaffold8588.20186PROTEIN STAR
mRNA.BJAM.scaffold8588.20187PROTEIN STAR
mRNA.BJAM.scaffold859.5514
mRNA.BJAM.scaffold859.5515
mRNA.BJAM.scaffold859.5517CHROMOBOX PROTEIN
mRNA.BJAM.scaffold8592.20188TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
mRNA.BJAM.scaffold8592.20189
mRNA.BJAM.scaffold8592.20190TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
mRNA.BJAM.scaffold8594.20191
mRNA.BJAM.scaffold8594.20192DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold8594.20193DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold8597.20194
mRNA.BJAM.scaffold8597.20195
mRNA.BJAM.scaffold8599.20196
mRNA.BJAM.scaffold86.657
mRNA.BJAM.scaffold86.658NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold860.5518ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold860.5519ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold8600.20198
mRNA.BJAM.scaffold8600.20199SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN
mRNA.BJAM.scaffold8601.20200
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