About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8749.20290HOMEOTIC PROTEIN DEFORMED
mRNA.BJAM.scaffold875.5584HISTONE H4
mRNA.BJAM.scaffold875.5585DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold875.5586
mRNA.BJAM.scaffold8751.20291
mRNA.BJAM.scaffold8751.20292
mRNA.BJAM.scaffold8758.20293SEPTIN
mRNA.BJAM.scaffold8758.20294UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
mRNA.BJAM.scaffold876.5587PROTEIN CBG12474
mRNA.BJAM.scaffold876.5588
mRNA.BJAM.scaffold876.5589RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold8767.20295ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
mRNA.BJAM.scaffold8767.20297
mRNA.BJAM.scaffold8767.20298
mRNA.BJAM.scaffold8768.20299UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING
mRNA.BJAM.scaffold8768.20300ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold877.5590
mRNA.BJAM.scaffold8770.20301
mRNA.BJAM.scaffold8771.20302
mRNA.BJAM.scaffold8773.20303
mRNA.BJAM.scaffold8777.20304BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
mRNA.BJAM.scaffold878.5591
mRNA.BJAM.scaffold878.5592
mRNA.BJAM.scaffold8781.20305LD21662P
mRNA.BJAM.scaffold8786.20306
mRNA.BJAM.scaffold8787.20307SOLUTE CARRIER FAMILY 39 ZINC TRANSPORTER , MEMBER 9-RELATED
mRNA.BJAM.scaffold879.5593SOLUTE CARRIER FAMILY 35 MEMBER B
mRNA.BJAM.scaffold879.5594TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER
mRNA.BJAM.scaffold8790.20308
mRNA.BJAM.scaffold8790.20309DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
mRNA.BJAM.scaffold8791.20310SAP DOMAIN-CONTAINING RIBONUCLEOPROTEIN
mRNA.BJAM.scaffold8792.20311RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG
mRNA.BJAM.scaffold8797.20312
mRNA.BJAM.scaffold8797.20313TRYPSIN-RELATED
mRNA.BJAM.scaffold880.5595GLUCOSYLCERAMIDASE
mRNA.BJAM.scaffold880.5596GLUCOSYLCERAMIDASE
mRNA.BJAM.scaffold880.5597GLUCOSYLCERAMIDASE
mRNA.BJAM.scaffold880.5598PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
mRNA.BJAM.scaffold880.5599
mRNA.BJAM.scaffold880.5600YALI0A06930P
mRNA.BJAM.scaffold880.5601
mRNA.BJAM.scaffold880.5602
mRNA.BJAM.scaffold8802.20314VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
mRNA.BJAM.scaffold8809.20316
mRNA.BJAM.scaffold881.5603
mRNA.BJAM.scaffold881.5604G-PROTEIN COUPLED RECEPTOR 158-RELATED
mRNA.BJAM.scaffold8810.20317CUTICLE PROTEIN
mRNA.BJAM.scaffold8810.20318CUTICLE PROTEIN
mRNA.BJAM.scaffold8810.20319CUTICLE PROTEIN
mRNA.BJAM.scaffold8810.20320CUTICLE PROTEIN
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