About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_019667-T1SIMILAR TO HYPOTHETICAL PROTEIN FLJ20508
OS493_019668-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 180
OS493_019669-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 180
OS493_019670-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 180
OS493_019671-T1RAS-RELATED PROTEIN RAB
OS493_019672-T1REGULATOR OF CHROMOSOME CONDENSATION
OS493_019673-T1
OS493_019674-T126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED
OS493_019675-T1
OS493_019676-T1
OS493_019677-T1MIXED LINEAGE PROTEIN KINASE
OS493_019678-T1MIXED LINEAGE PROTEIN KINASE
OS493_019679-T1
OS493_019680-T1
OS493_019681-T1LEUCOKININ RECEPTOR-RELATED
OS493_019682-T1G-PROTEIN COUPLED RECEPTOR
OS493_019683-T1LEUCOKININ RECEPTOR-RELATED
OS493_019684-T1G-PROTEIN COUPLED RECEPTOR
OS493_019685-T1LEUCOKININ RECEPTOR-RELATED
OS493_019686-T1LEUCOKININ RECEPTOR-RELATED
OS493_019687-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019688-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019689-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019690-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019691-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019692-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019693-T1
OS493_019694-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019695-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
OS493_019696-T1
OS493_019697-T1URICASE
OS493_019698-T1
OS493_019699-T1
OS493_019700-T1
OS493_019701-T1
OS493_019702-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_019703-T1PROTEIN CBG12474
OS493_019704-T1
OS493_019705-T1LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
OS493_019706-T1LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
OS493_019707-T1
OS493_019708-T1LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
OS493_019709-T1CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR
OS493_019710-T1UNCHARACTERIZED
OS493_019711-T1
OS493_019712-T1
OS493_019713-T1
OS493_019714-T1DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
OS493_019715-T1
OS493_019716-T1
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