The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS16951 | PROTEIN DIAPHANOUS |
HS16952 | |
HS16953 | NEUROTRANSMITTER GATED ION CHANNEL |
HS16954 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |
HS16955 | 60S RIBOSOMAL PROTEIN L36A/L44 |
HS16956 | TYROSINE-PROTEIN KINASE |
HS16957 | |
HS16958 | UNCHARACTERIZED |
HS16959 | METHIONYL-TRNA SYNTHETASE |
HS16960 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 |
HS16961 | ATP-BINDING CASSETTE SUB-FAMILY C |
HS16962 | ECTO-NOX DISULFIDE-THIOL EXCHANGER |
HS16963 | B-BOX DOMAIN CONTAINING |
HS16964 | ECTO-NOX DISULFIDE-THIOL EXCHANGER |
HS16965 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS16966 | ANION EXCHANGE PROTEIN |
HS16967 | GDNF RECEPTOR ALPHA |
HS16968 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
HS16969 | SIDEROFLEXIN |
HS16970 | RAB11-RELATED |
HS16971 | BEN DOMAIN-CONTAINING PROTEIN 4 |
HS16972 | SHISA |
HS16973 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
HS16974 | GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1 |
HS16975 | HUEL-CATION TRANSPORTER |
HS16976 | GLUTATHIONE REDUCTASE |
HS16977 | ZINC FINGER PROTEIN |
HS16978 | SH2 DOMAIN CONTAINING PROTEIN |
HS16979 | HEPARAN SULFATE SULFOTRANSFERASE |
HS16980 | - |
HS16981 | HOMEOBOX PROTEIN NKX |
HS16982 | BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 LIKE 1 |
HS16983 | SERINE/THREONINE-PROTEIN KINASE IAL-RELATED |
HS16984 | F-BOX PROTEIN-LIKE |
HS16985 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
HS16986 | |
HS16987 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
HS16988 | STROMAL ANTIGEN |
HS16989 | GLYPICAN |
HS16990 | INTEGRIN ALPHA |
HS16991 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
HS16992 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
HS16993 | SLIT HOMOLOG |
HS16994 | FIBROBLAST GROWTH FACTOR RECEPTOR |
HS16995 | |
HS16996 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
HS16997 | SPONDIN |
HS16998 | C-TERMINAL-BINDING PROTEIN |
HS16999 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
HS17000 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |