About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS16651UNCHARACTERIZED
HS16652
HS16653GLYCOSYL HYDROLASE
HS16654UBIQUITIN-CONJUGATING ENZYME E2
HS16655
HS16656ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS16657NEUROTRANSMITTER GATED ION CHANNEL
HS16658UNCHARACTERIZED
HS16659DAP3-BINDING CELL DEATH ENHANCER 1
HS16660SCP160
HS16661SPARC OSTEONECTIN
HS16662PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
HS16663WD40 REPEAT PF20
HS16664
HS16665FIBROBLAST GROWTH FACTOR
HS16666CADHERIN-87A
HS16667CADHERIN-87A
HS16668CADHERIN-87A
HS16669CADHERIN-87A
HS16670CADHERIN-87A
HS16671CADHERIN-87A
HS16672CADHERIN-87A
HS16673CADHERIN-87A
HS16674CADHERIN-87A
HS16675CADHERIN-87A
HS16676ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
HS16677CADHERIN-87A
HS16678CADHERIN-87A
HS16679CADHERIN-87A
HS16680
HS16681CADHERIN-87A
HS16682CADHERIN-87A
HS16683CADHERIN-87A
HS16684CADHERIN-87A
HS16685CADHERIN-87A
HS16686CADHERIN-87A
HS16687CADHERIN-87A
HS16688CADHERIN-87A
HS16689CADHERIN-87A
HS16690CADHERIN-87A
HS16691CADHERIN-87A
HS16692PROTEIN CBG26694
HS16693
HS16694CADHERIN-87A
HS16695CADHERIN-87A
HS16696CADHERIN-87A
HS16697CADHERIN-87A
HS16698CADHERIN-87A
HS16699CADHERIN-87A
HS16700CADHERIN-87A
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