About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS16451BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS16452MISSHAPEN LIKE KINASE 1
HS16453BASIGIN RELATED
HS16454HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
HS16455GDNF RECEPTOR ALPHA
HS16456PROTEIN MGARP
HS16457N-TERMINAL ACETYLTRANSFERASE-RELATED
HS16458ETS
HS16459CARBON CATABOLITE REPRESSOR PROTEIN 4
HS16460REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS16461CADHERIN-87A
HS16462REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS16463REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS16464BETA/GAMMA CRYSTALLIN
HS16465CADHERIN-87A
HS16466REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS16467DUAL SPECIFICITY PROTEIN KINASE
HS16468LONG-CHAIN-FATTY-ACID--COA LIGASE
HS16469AMINO ACID TRANSPORTER
HS16470MALATE SYNTHASE
HS16471HISTIDYL-TRNA SYNTHETASE
HS16472
HS16473MITOFILIN
HS16474HISTONE RNA HAIRPIN-BINDING PROTEIN
HS16475UNCHARACTERIZED
HS16476ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
HS16477WINGED HELIX DOMAIN-CONTAINING PROTEIN
HS16478WINGED HELIX DOMAIN-CONTAINING PROTEIN
HS16479WINGED HELIX DOMAIN-CONTAINING PROTEIN
HS16480SERINE PROTEASE INHIBITOR
HS16481CASEIN KINASE-RELATED
HS16482F-BOX ONLY PROTEIN 38
HS16483DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED
HS16484IMMUNOGLOBULIN-BINDING PROTEIN 1
HS16485PROTEIN ABHD18
HS16486ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS16487ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS16488E3 UBIQUITIN-PROTEIN LIGASE RNF103
HS16489ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS16490ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS16491E3 UBIQUITIN-PROTEIN LIGASE TM129
HS16492BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS16493PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
HS16494EPM2A-INTERACTING PROTEIN 1
HS16495REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS16496SI:CH211-196P9.1-RELATED
HS16497SLIT AND NTRK-LIKE PROTEIN 4-RELATED
HS16498SI:CH211-196P9.1-RELATED
HS16499SI:CH211-196P9.1-RELATED
HS16500UNCHARACTERIZED
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