About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 331 332 333 334 335 336 337 338 339 340 Forward> Last>>        450 pages in total

Gene IDDescription
HS16801E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
HS16802PHOSPHOETHANOLAMINE METHYLTRANSFERASE
HS16803ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.
HS16804F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
HS16805MONOCARBOXYLATE TRANSPORTER
HS16806
HS16807THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
HS16808TYPE 2 DNA TOPOISOMERASE 6 SUBUNIT B-LIKE
HS16809DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT
HS16810
HS16811PALMITOYLTRANSFERASE ZDHHC16
HS16812
HS16813SODIUM/POTASSIUM/CALCIUM EXCHANGER
HS16814SODIUM/POTASSIUM/CALCIUM EXCHANGER
HS16815HL01030P-RELATED
HS16816HIGH-AFFINITY CHOLINE TRANSPORTER 1
HS16817ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED
HS16818DAPPER-RELATED
HS16819MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
HS16820EH DOMAIN
HS16821UBX DOMAIN-CONTAINING PROTEIN 1
HS16822PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
HS16823ALPHA-GLUCOSIDASE
HS16824INTEGRATOR COMPLEX SUBUNIT 5
HS16825HRAS-LIKE SUPPRESSOR - RELATED
HS16826SCY1-RELATED S/T PROTEIN KINASE-LIKE
HS16827
HS16828TETRASPANIN
HS16829HOOK PROTEINS
HS16830GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
HS16831PUTATIVE PHOSPHOTRANSFERASE
HS16832AGAP008170-PA
HS16833ZINC FINGER PROTEIN
HS16834RIBONUCLEASE H2 SUBUNIT C
HS16835INOSITOL POLYPHOSPHATE KINASE
HS16836NUCLEAR RNA EXPORT FACTOR
HS16837AUTOPHAGY-RELATED 2, ISOFORM A
HS16838UPF0315 PROTEIN-RELATED
HS16839TGF-BETA FAMILY
HS16840POTASSIUM CHANNEL, SUBFAMILY K
HS16841CMF/LEK/CENP CELL DIVISION-RELATED
HS16842
HS16843SYNTAXIN
HS16844VASCULAR ENDOTHELIAL GROWTH FACTOR
HS16845DNAJ HOMOLOG SUBFAMILY C MEMBER 4
HS16846URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE
HS16847HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
HS16848
HS16849TRANSMEMBRANE PROTEIN 179
HS16850HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
TOP