About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS16701
HS16702CADHERIN-87A
HS16703CADHERIN-87A
HS16704
HS16705CADHERIN-87A
HS16706CADHERIN-87A
HS16707CADHERIN-87A
HS16708CADHERIN-87A
HS16709CADHERIN-87A
HS16710CADHERIN-87A
HS16711CADHERIN-87A
HS16712CADHERIN-87A
HS16713CADHERIN-87A
HS16714CADHERIN-87A
HS16715CADHERIN-87A
HS16716CADHERIN-87A
HS16717CADHERIN-87A
HS16718CADHERIN-87A
HS16719CADHERIN-87A
HS16720CADHERIN-87A
HS16721CADHERIN-87A
HS16722CADHERIN-87A
HS16723CADHERIN-87A
HS16724CADHERIN-87A
HS16725CADHERIN-87A
HS16726CADHERIN-87A
HS16727CADHERIN-87A
HS16728CADHERIN-87A
HS16729CADHERIN-87A
HS16730CADHERIN-87A
HS16731PROTEIN DIAPHANOUS
HS16732UDP/ADP-SUGAR PYROPHOSPHATASE
HS16733
HS16734TRANSIENT RECEPTOR POTENTIAL CHANNEL
HS16735DEDICATOR OF CYTOKINESIS
HS16736INHIBITORY SYNAPTIC FACTOR 2A-RELATED
HS167375-HYDROXYTRYPTAMINE RECEPTOR
HS16738IP01054P
HS16739CALCIUM BINDING PROTEINS
HS16740CHROMOSOME 4 OPEN READING FRAME 50
HS16741UNCHARACTERIZED
HS16742WOLFRAMIN
HS16743PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B
HS16744
HS16745KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS16746ZINC FINGER PROTEIN
HS16747D-DOPACHROME DECARBOXYLASE
HS16748ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS16749ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1
HS16750E3 UBIQUITIN-PROTEIN LIGASE TRIM
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