About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS15851REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15852MIP04163P
HS15853UNCHARACTERIZED
HS15854LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
HS15855MYOGENIC FACTOR
HS15856MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1
HS15857PROTEASOME SUBUNIT ALPHA/BETA
HS15858SYNAPTOBREVIN FAMILY MEMBER
HS15859CXC DOMAIN-CONTAINING PROTEIN-RELATED
HS15860REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15861REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15862REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15863REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15864REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15865RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
HS15866RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
HS15867GENE, 49355-RELATED
HS15868ZINC FINGER PROTEIN
HS15869CALCIUM-DEPENDENT SECRETION ACTIVATOR
HS15870NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
HS15871LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2
HS15872G0/G1 SWITCH PROTEIN 2
HS15873NETRIN/LAMININ-RELATED
HS15874SERINE/THREONINE-PROTEIN KINASE
HS15875UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS15876ZINC FINGER PROTEIN
HS15877OS05G0565100 PROTEIN
HS15878ATAXIN 7 RELATED
HS15879SYNAPTOPHYSIN
HS15880ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING
HS15881KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS15882PROTEIN SIDEKICK
HS15883PROTEIN SIDEKICK
HS15884CHITINASE
HS15885CHITINASE
HS15886CHITINASE
HS15887ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1
HS15888STATHMIN
HS15889DNA2/NAM7 HELICASE FAMILY MEMBER
HS15890EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
HS15891CONNECTIVE TISSUE GROWTH FACTOR-RELATED
HS15892NEUROPEPTIDE S RECEPTOR
HS15893SERINE INCORPORATOR
HS15894TAPASIN
HS15895NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE
HS15896D-XYLOSE-PROTON SYMPORTER-LIKE 2
HS15897CASEIN KINASE II SUBUNIT ALPHA
HS15898BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
HS15899ZINC FINGER PROTEIN
HS15900UBIQUITIN-CONJUGATING ENZYME E2
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