About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS15701GTP-BINDING PROTEIN ALPHA SUBUNIT
HS15702PAK4-INHIBITOR INKA1-RELATED
HS15703COLLAGEN ALPHA
HS15704NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS15705INOSITOL POLYPHOSPHATE KINASE
HS15706SECY/SEC61-ALPHA FAMILY MEMBER
HS15707COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4
HS15708UROCANATE HYDRATASE
HS15709SERINE/THREONINE-PROTEIN KINASE
HS15710-
HS157116-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
HS15712ARP2/3 COMPLEX 20 KD SUBUNIT
HS15713RAB FAMILY
HS15714FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS15715TRANSCRIPTION FACTOR GATA FAMILY MEMBER
HS15716ELONGATION FACTOR TU-RELATED
HS15717RUVB-RELATED REPTIN AND PONTIN
HS15718
HS15719ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED
HS15720SERINE/THREONINE-PROTEIN KINASE
HS15721FACIOGENITAL DYSPLASIA PROTEIN
HS15722UNCHARACTERIZED
HS15723GHRELIN PRECURSOR
HS15724DEOXYRIBONUCLEASE TATDN2-RELATED
HS15725
HS15726CEREBLON
HS15727PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P
HS15728TYROSINE-PROTEIN KINASE RECEPTOR
HS15729ADP RIBOSYLATION FACTOR-RELATED
HS15730PEPTIDYLPROLYL ISOMERASE
HS1573140S RIBOSOMAL PROTEIN S26
HS15732ZINC FINGER PROTEIN
HS15733RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
HS15734AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT
HS15735TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS15736ANKYRIN REPEAT CONTAINING
HS15737RHO GUANINE EXCHANGE FACTOR-RELATED
HS15738GLYCO_TRANS_2-LIKE DOMAIN-CONTAINING PROTEIN
HS15739OS-9-RELATED
HS15740BETA1,3-GALACTOSYLTRANSFERASE
HS15741APOLIPOPROTEIN F
HS15742SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
HS15743G-PROTEIN COUPLED RECEPTOR
HS15744DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
HS15745BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS15746ELONGATION FACTOR TS
HS15747PLACENTAL PROTEIN 11-RELATED
HS15748MYOSIN LIGHT CHAIN 1, 3
HS15749SWI/SNF COMPLEX-RELATED
HS15750CEREBELLIN-RELATED
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