About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS15501VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
HS15502HYALURONIDASE
HS15503HYALURONIDASE
HS15504TUMOR SUPPRESSOR CANDIDATE 2
HS15505RASSF
HS15506NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4
HS15507HEMK METHYLTRANSFERASE
HS15508PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS15509TWINFILIN
HS15510WD40 REPEAT PROTEIN SWD2
HS15511GLYCERATE KINASE
HS15512T-CELL LEUKEMIA TRANSLOCATION-ALTERED GENE PROTEIN
HS15513SAND PROTEIN-RELATED
HS15514PHD FINGER PROTEINS
HS15515IONOTROPIC GLUTAMATE RECEPTOR
HS15516PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS15517SKI ONCOGENE-RELATED
HS15518TRANSMEMBRANE PROTEIN 51
HS15519KAZRIN-RELATED
HS15520KAZRIN-RELATED
HS15521PR DOMAIN ZINC FINGER PROTEIN
HS15522FORKHEAD BOX PROTEIN J2 FAMILY MEMBER
HS15523CORNICHON-RELATED
HS15524SOMETHING ABOUT SILENCING PROTEIN 10-RELATED
HS15525UNCHARACTERIZED
HS15526EPITHELIAL MEMBRANE PROTEIN-RELATED
HS15527COILED-COIL DOMAIN-CONTAINING PROTEIN 30
HS15528
HS15529GLYCOSYLTRANSFERASE-RELATED
HS15530KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS15531
HS15532E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS15533TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5
HS15534MIGRATION AND INVASION-INHIBITORY PROTEIN
HS15535ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
HS15536-
HS15537SUGAR TRANSPORTER
HS15538
HS15539UNCHARACTERIZED
HS15540CALCIUM-SENSING RECEPTOR-RELATED
HS15541GENE 33 POLYPEPTIDE
HS1554230S RIBOSOMAL PROTEIN S16
HS15543PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
HS15544PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
HS15545HYPERKINETIC, ISOFORM M
HS15546SCAVENGER RECEPTOR CLASS F
HS15547NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED
HS15548MRNA TURNOVER PROTEIN 4 MRTO4
HS155491-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FAMILY MEMBER
HS15550TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1
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