About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_000101-T1
OS493_000102-T1
OS493_000103-T1UNCHARACTERIZED
OS493_000104-T1QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1
OS493_000105-T1
OS493_000106-T1
OS493_000107-T1
OS493_000108-T1ATP SYNTHASE DELTA CHAIN
OS493_000109-T1MRN COMPLEX-INTERACTING PROTEIN
OS493_000110-T1G PROTEIN-COUPLED RECEPTOR 157-RELATED
OS493_000111-T1
OS493_000112-T1
OS493_000113-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_000114-T1
OS493_000115-T1MINA53 MYC INDUCED NUCLEAR ANTIGEN
OS493_000116-T1FRIZZLED
OS493_000118-T1FRIZZLED
OS493_000119-T1QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1
OS493_000120-T1
OS493_000121-T1
OS493_000122-T1
OS493_000123-T1
OS493_000124-T1
OS493_000126-T1ORGANIC ANION TRANSPORTER
OS493_000127-T1ORGANIC ANION TRANSPORTER
OS493_000128-T1HOMEOBOX PROTEIN EMX-RELATED
OS493_000129-T1
OS493_000130-T1
OS493_000131-T1
OS493_000132-T1
OS493_000133-T1
OS493_000134-T1
OS493_000135-T1ORGANIC ANION TRANSPORTER
OS493_000136-T1ORGANIC ANION TRANSPORTER
OS493_000137-T1SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN
OS493_000138-T1URIDINE KINASE
OS493_000139-T1SPERMINE SYNTHASE
OS493_000140-T1
OS493_000141-T1
OS493_000143-T1
OS493_000144-T1
OS493_000145-T1
OS493_000146-T1
OS493_000147-T1HELIX LOOP HELIX PROTEIN 21-RELATED
OS493_000148-T1
OS493_000149-T1HELIX LOOP HELIX PROTEIN 21-RELATED
OS493_000150-T1
OS493_000151-T1
OS493_000152-T1
OS493_000153-T1SPERMINE SYNTHASE
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