About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS14801SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS14802SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS14803RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
HS14804SOLUTE CARRIER FAMILY 22 MEMBER
HS14805PHD-TYPE DOMAIN-CONTAINING PROTEIN
HS14806SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
HS14807KINESIN-LIKE PROTEIN KIF11
HS14808KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS14809UNCHARACTERIZED
HS14810ZINC FINGER PROTEIN
HS14811SULFOTRANSFERASE SULT
HS14812ZINC TRANSPORTER 6
HS14813FORKHEAD BOX PROTEIN G1
HS14814ACYLPHOSPHATASE
HS14815SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
HS14816WD-40 REPEAT PROTEIN
HS14817RETICULON-LIKE PROTEIN
HS14818CLATHRIN HEAVY CHAIN RELATED
HS14819UBIQUITIN
HS14820TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
HS14821G-PROTEIN COUPLED RECEPTOR
HS14822FILENSIN
HS14823PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
HS14824OTORAPLIN
HS14825ELONGATION FACTOR TU-RELATED
HS14826DNA POLYMERASE ETA
HS14827
HS14828VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
HS14829GLIAL FIBRILLARY ACIDIC PROTEIN
HS14830O-METHYLTRANSFERASE-RELATED
HS14831ZINC-FINGER PROTEIN NOLZ1-RELATED
HS14832LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN
HS14833
HS14834CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
HS14835DISKS LARGE HOMOLOG 5
HS14836ANNEXIN
HS14837
HS14838PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
HS14839ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
HS1484040S RIBOSOMAL PROTEIN S24
HS14841EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN
HS14842INORGANIC PYROPHOSPHATASE
HS14843RE74312P
HS14844SERINE PROTEASE-RELATED
HS14845SPARC OSTEONECTIN
HS14846DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4
HS14847AT29763P-RELATED
HS14848TRNA (URACIL-5-)-METHYLTRANSFERASE
HS14849ACYL-COA DESATURASE
HS14850WNT RELATED
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