About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3921.14780
mRNA.BJAM.scaffold3921.14781
mRNA.BJAM.scaffold3921.14782
mRNA.BJAM.scaffold3921.14783
mRNA.BJAM.scaffold3922.14784SLD5 PROTEIN
mRNA.BJAM.scaffold3923.14785
mRNA.BJAM.scaffold3925.14786ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
mRNA.BJAM.scaffold3925.14787
mRNA.BJAM.scaffold3926.14789TRYPTASE-RELATED
mRNA.BJAM.scaffold3926.14790TRYPTASE-RELATED
mRNA.BJAM.scaffold3926.14791SERINE PROTEASE-RELATED
mRNA.BJAM.scaffold3926.14792GLYCOPROTEIN HORMONE RECEPTOR
mRNA.BJAM.scaffold3927.14793
mRNA.BJAM.scaffold3927.14795ALPHA-AMYLASE FAMILY MEMBER
mRNA.BJAM.scaffold3928.14796GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.scaffold3929.14797NUCLEAR FACTOR NF-KAPPA-B PROTEIN
mRNA.BJAM.scaffold3929.14798RNA-BINDING PROTEIN LUC7-RELATED
mRNA.BJAM.scaffold3929.14799
mRNA.BJAM.scaffold3929.14800
mRNA.BJAM.scaffold393.2936
mRNA.BJAM.scaffold393.2937TB1 PROTEIN-RELATED
mRNA.BJAM.scaffold393.2938BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II
mRNA.BJAM.scaffold393.2939ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.scaffold393.2940N-ACETYLGALACTOSAMINYLTRANSFERASE
mRNA.BJAM.scaffold393.2941STAGA COMPLEX 65 SUBUNIT GAMMA
mRNA.BJAM.scaffold393.2942KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
mRNA.BJAM.scaffold393.2943ACETYL-COA C-ACYLTRANSFERASE
mRNA.BJAM.scaffold393.2944
mRNA.BJAM.scaffold3930.1480160S RIBOSOMAL PROTEIN L24
mRNA.BJAM.scaffold3930.14802
mRNA.BJAM.scaffold3930.14803
mRNA.BJAM.scaffold3930.14804
mRNA.BJAM.scaffold3931.14805SERINE/THREONINE-PROTEIN KINASE PLK
mRNA.BJAM.scaffold3931.14806
mRNA.BJAM.scaffold3931.14807G PATCH DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold3931.14808EAP30 SUBUNIT OF ELL COMPLEX
mRNA.BJAM.scaffold3931.14809
mRNA.BJAM.scaffold3931.14810WD40 REPEAT PROTEIN
mRNA.BJAM.scaffold3934.14811
mRNA.BJAM.scaffold3934.14812
mRNA.BJAM.scaffold3935.14813MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
mRNA.BJAM.scaffold3935.1481441-2 PROTEIN ANTIGEN-RELATED
mRNA.BJAM.scaffold3935.1481541-2 PROTEIN ANTIGEN-RELATED
mRNA.BJAM.scaffold3937.14816
mRNA.BJAM.scaffold3938.1481730S 40S RIBOSOMAL PROTEIN
mRNA.BJAM.scaffold3938.14818N-MYC DOWNSTREAM REGULATED
mRNA.BJAM.scaffold3939.14819RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F
mRNA.BJAM.scaffold3939.14820
mRNA.BJAM.scaffold3939.148212-OXOGLUTARATE DEHYDROGENASE
mRNA.BJAM.scaffold3939.148222-OXOGLUTARATE DEHYDROGENASE
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