About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3977.14886
mRNA.BJAM.scaffold3978.14887CELL CYCLE CONTROL PROTEIN 50
mRNA.BJAM.scaffold3978.14888CELL CYCLE CONTROL PROTEIN 50
mRNA.BJAM.scaffold3978.14889POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold3979.14890
mRNA.BJAM.scaffold3979.14891MATRIN 3/NUCLEAR PROTEIN 220-RELATED
mRNA.BJAM.scaffold3979.14892MATRIN 3/NUCLEAR PROTEIN 220-RELATED
mRNA.BJAM.scaffold3979.14893MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28
mRNA.BJAM.scaffold398.2985UNCHARACTERIZED
mRNA.BJAM.scaffold398.2986SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold398.2987
mRNA.BJAM.scaffold398.2988
mRNA.BJAM.scaffold398.2989RIBOSOMAL PROTEIN L13
mRNA.BJAM.scaffold398.2990RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold398.2991PCD6 INTERACTING PROTEIN-RELATED
mRNA.BJAM.scaffold398.2992PCD6 INTERACTING PROTEIN-RELATED
mRNA.BJAM.scaffold398.2993
mRNA.BJAM.scaffold398.2994
mRNA.BJAM.scaffold3981.14894GLYOXALASE DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold3982.14895
mRNA.BJAM.scaffold3982.14896RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14897RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14898RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14899RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14900RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14901RABCONNECTIN-RELATED
mRNA.BJAM.scaffold3982.14902KH DOMAIN CONTAINING RNA BINDING PROTEIN
mRNA.BJAM.scaffold3982.14903DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5
mRNA.BJAM.scaffold3982.14904UNCHARACTERIZED
mRNA.BJAM.scaffold3983.14905TRIACYLGLYCEROL LIPASE
mRNA.BJAM.scaffold3983.14906PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B
mRNA.BJAM.scaffold3983.14907EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold3983.14908EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold3983.14909EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold3986.14910MYOSIN LIGHT CHAIN 1, 3
mRNA.BJAM.scaffold3988.14911POLYSERASE-RELATED
mRNA.BJAM.scaffold3988.14912POLYSERASE-RELATED
mRNA.BJAM.scaffold3988.14913POLYSERASE-RELATED
mRNA.BJAM.scaffold3988.14914SOLUTE CARRIER FAMILY 5
mRNA.BJAM.scaffold3988.14915
mRNA.BJAM.scaffold3988.14916SOLUTE CARRIER FAMILY 5
mRNA.BJAM.scaffold3988.14917SOLUTE CARRIER FAMILY 5
mRNA.BJAM.scaffold399.2995
mRNA.BJAM.scaffold399.2996DOCKING PROTEIN RELATED
mRNA.BJAM.scaffold399.2997
mRNA.BJAM.scaffold399.2998
mRNA.BJAM.scaffold399.2999MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED
mRNA.BJAM.scaffold3992.14918
mRNA.BJAM.scaffold3992.14919
mRNA.BJAM.scaffold3993.14920
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