About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold385.2901
mRNA.BJAM.scaffold385.2902SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold3850.14664PIKACHURIN-LIKE PROTEIN
mRNA.BJAM.scaffold3850.14665RE45066P-RELATED
mRNA.BJAM.scaffold3852.14666STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold3852.14667
mRNA.BJAM.scaffold3852.14668STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold3854.14669
mRNA.BJAM.scaffold3854.14670
mRNA.BJAM.scaffold3854.14671
mRNA.BJAM.scaffold3855.146726-PHOSPHOGLUCONOLACTONASE
mRNA.BJAM.scaffold3855.14673
mRNA.BJAM.scaffold3856.14674UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
mRNA.BJAM.scaffold3856.14675
mRNA.BJAM.scaffold3858.14676
mRNA.BJAM.scaffold3861.14677ACETOACETYL-COA SYNTHETASE
mRNA.BJAM.scaffold3861.14678ACETOACETYL-COA SYNTHETASE
mRNA.BJAM.scaffold3861.14679ACETOACETYL-COA SYNTHETASE
mRNA.BJAM.scaffold3863.14680TYROSINE-PROTEIN KINASE
mRNA.BJAM.scaffold3863.14681
mRNA.BJAM.scaffold3863.14682VESICULAR-FUSION PROTEIN NSF
mRNA.BJAM.scaffold3864.14683
mRNA.BJAM.scaffold3865.14684HISTONE H2B
mRNA.BJAM.scaffold3866.14685BASIGIN RELATED
mRNA.BJAM.scaffold3866.14686
mRNA.BJAM.scaffold3866.14687
mRNA.BJAM.scaffold3868.14688APOLIPOPROTEIN D
mRNA.BJAM.scaffold3869.14689
mRNA.BJAM.scaffold387.2903
mRNA.BJAM.scaffold387.2904PANTOTHENATE KINASE
mRNA.BJAM.scaffold387.2905PANTOTHENATE KINASE
mRNA.BJAM.scaffold387.2906
mRNA.BJAM.scaffold387.2907ALCOHOL DEHYDROGENASE RELATED
mRNA.BJAM.scaffold387.2908
mRNA.BJAM.scaffold387.2909
mRNA.BJAM.scaffold387.2910UNCHARACTERIZED
mRNA.BJAM.scaffold387.2911OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
mRNA.BJAM.scaffold387.2912OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
mRNA.BJAM.scaffold387.2913OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
mRNA.BJAM.scaffold387.2914OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
mRNA.BJAM.scaffold387.2915ADENYLATE CYCLASE TYPE 1
mRNA.BJAM.scaffold387.2916ADENYLATE CYCLASE TYPE 1
mRNA.BJAM.scaffold387.2917CONTACTIN 5
mRNA.BJAM.scaffold387.2918RHO GTPASE-ACTIVATING PROTEIN 100F
mRNA.BJAM.scaffold387.2919RHO GTPASE-ACTIVATING PROTEIN 100F
mRNA.BJAM.scaffold3870.14690
mRNA.BJAM.scaffold3871.14691
mRNA.BJAM.scaffold3871.14692
mRNA.BJAM.scaffold3871.1469330S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR
mRNA.BJAM.scaffold3871.14694
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