About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold379.2845
mRNA.BJAM.scaffold379.2846SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
mRNA.BJAM.scaffold379.2847SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
mRNA.BJAM.scaffold379.2848SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
mRNA.BJAM.scaffold379.2849SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
mRNA.BJAM.scaffold379.2850SNARE PROTEINS
mRNA.BJAM.scaffold3791.14572ATAXIN 2-BINDING PROTEIN 1-RELATED
mRNA.BJAM.scaffold3791.14573
mRNA.BJAM.scaffold3792.14574
mRNA.BJAM.scaffold3793.14575
mRNA.BJAM.scaffold3794.14576BAND 7 PROTEIN-RELATED
mRNA.BJAM.scaffold3794.14577BAND 7 PROTEIN-RELATED
mRNA.BJAM.scaffold3795.14578
mRNA.BJAM.scaffold3795.14579SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold3798.14580F-BOX/TPR REPEAT PROTEIN POF3
mRNA.BJAM.scaffold3798.14583
mRNA.BJAM.scaffold3798.14584FACTOR VIII-ASSOCIATED GENE 1
mRNA.BJAM.scaffold3798.14585
mRNA.BJAM.scaffold38.283
mRNA.BJAM.scaffold38.284
mRNA.BJAM.scaffold38.285DUAL SPECIFICITY PROTEIN KINASE
mRNA.BJAM.scaffold38.286
mRNA.BJAM.scaffold38.287LIM/HOMEOBOX PROTEIN LHX
mRNA.BJAM.scaffold380.2851FERM DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold380.2852FERM DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold380.2853
mRNA.BJAM.scaffold380.2854PROTON MYO-INOSITOL COTRANSPORTER
mRNA.BJAM.scaffold380.2855PROTON MYO-INOSITOL COTRANSPORTER
mRNA.BJAM.scaffold380.2856
mRNA.BJAM.scaffold380.2857PROTEIN PHOSPHATASE 2C
mRNA.BJAM.scaffold380.2858ES1 PROTEIN HOMOLOG, MITOCHONDRIAL
mRNA.BJAM.scaffold380.2859PYRAZINAMIDASE/NICOTINAMIDASE
mRNA.BJAM.scaffold380.2860
mRNA.BJAM.scaffold380.2861IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold380.2862
mRNA.BJAM.scaffold380.2863
mRNA.BJAM.scaffold380.2864SWI/SNF COMPLEX-RELATED
mRNA.BJAM.scaffold380.2865ETHANOLAMINEPHOSPHOTRANSFERASE
mRNA.BJAM.scaffold380.2866SET AND MYND DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold380.2867SET AND MYND DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold380.2868
mRNA.BJAM.scaffold380.2869
mRNA.BJAM.scaffold3800.14586CALCYPHOSIN
mRNA.BJAM.scaffold3801.14587ELECTRON TRANSPORT OXIDOREDUCTASE
mRNA.BJAM.scaffold3804.14588PROTEIN TAR1
mRNA.BJAM.scaffold3805.14589
mRNA.BJAM.scaffold3805.14590DNA LIGASE 4
mRNA.BJAM.scaffold3805.14591DNA LIGASE 4
mRNA.BJAM.scaffold3805.14592DNA LIGASE 4
mRNA.BJAM.scaffold3805.14593SHC TRANSFORMING PROTEIN
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