About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3837.14636
mRNA.BJAM.scaffold3837.14637METALLOPROTEASE M41 FTSH
mRNA.BJAM.scaffold3837.14638
mRNA.BJAM.scaffold3837.14639NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE
mRNA.BJAM.scaffold3838.14640CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold3838.14641
mRNA.BJAM.scaffold384.2879UNCHARACTERIZED
mRNA.BJAM.scaffold384.2880TRANSLATIONAL ACTIVATOR GCN1-RELATED
mRNA.BJAM.scaffold384.2881HIGH-AFFINITY CHOLINE TRANSPORTER 1
mRNA.BJAM.scaffold384.2882
mRNA.BJAM.scaffold384.2883BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
mRNA.BJAM.scaffold384.2884
mRNA.BJAM.scaffold384.2885
mRNA.BJAM.scaffold384.2886
mRNA.BJAM.scaffold384.2887
mRNA.BJAM.scaffold384.2888
mRNA.BJAM.scaffold384.2889PHOSPHATIDYLINOSITOL KINASE
mRNA.BJAM.scaffold384.2890
mRNA.BJAM.scaffold384.2891
mRNA.BJAM.scaffold384.2892HELICASE SRCAP-RELATED
mRNA.BJAM.scaffold384.2893HELICASE SRCAP-RELATED
mRNA.BJAM.scaffold384.2894E1A-BINDING PROTEIN P400-RELATED
mRNA.BJAM.scaffold384.2895
mRNA.BJAM.scaffold3841.14642HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3
mRNA.BJAM.scaffold3841.14643SI:CH211-266K2.1
mRNA.BJAM.scaffold3841.14644CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
mRNA.BJAM.scaffold3841.14645ARFAPTIN-RELATED
mRNA.BJAM.scaffold3843.14646ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold3843.14647TRANSLATION FACTOR
mRNA.BJAM.scaffold3843.14648
mRNA.BJAM.scaffold3843.14649
mRNA.BJAM.scaffold3844.14650PEPTIDYL-TRNA HYDROLASE 2
mRNA.BJAM.scaffold3844.14651METALLOPROTEASE TLDD
mRNA.BJAM.scaffold3845.14652
mRNA.BJAM.scaffold3845.14653
mRNA.BJAM.scaffold3845.14654
mRNA.BJAM.scaffold3845.14655
mRNA.BJAM.scaffold3845.14656
mRNA.BJAM.scaffold3845.14657
mRNA.BJAM.scaffold3845.14658
mRNA.BJAM.scaffold3845.14659
mRNA.BJAM.scaffold3845.14660
mRNA.BJAM.scaffold3847.14661NFATC2-INTERACTING PROTEIN
mRNA.BJAM.scaffold3848.14662
mRNA.BJAM.scaffold3848.14663TRYPTASE-RELATED
mRNA.BJAM.scaffold385.2896
mRNA.BJAM.scaffold385.2897ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
mRNA.BJAM.scaffold385.2898ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
mRNA.BJAM.scaffold385.2899
mRNA.BJAM.scaffold385.2900
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