About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold396.2971SRCR DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold396.2972TRYPSIN-RELATED
mRNA.BJAM.scaffold396.2973UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
mRNA.BJAM.scaffold396.2974SLIT HOMOLOG
mRNA.BJAM.scaffold396.2975SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
mRNA.BJAM.scaffold396.2976SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
mRNA.BJAM.scaffold3960.14850
mRNA.BJAM.scaffold3960.14851COILED-COIL DOMAIN-CONTAINING PROTEIN 39
mRNA.BJAM.scaffold3960.14852IFT57/HIPPI
mRNA.BJAM.scaffold3960.14853
mRNA.BJAM.scaffold3961.14854
mRNA.BJAM.scaffold3963.14855ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
mRNA.BJAM.scaffold3964.14856MRNA-CAPPING ENZYME
mRNA.BJAM.scaffold3965.14857AMINO ACID TRANSPORTER
mRNA.BJAM.scaffold3965.14858
mRNA.BJAM.scaffold3966.14859
mRNA.BJAM.scaffold3967.14860
mRNA.BJAM.scaffold3967.14861
mRNA.BJAM.scaffold3967.14862
mRNA.BJAM.scaffold3967.14863
mRNA.BJAM.scaffold3969.14864
mRNA.BJAM.scaffold3969.14865
mRNA.BJAM.scaffold3969.14866FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
mRNA.BJAM.scaffold3969.14867FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
mRNA.BJAM.scaffold3969.14868
mRNA.BJAM.scaffold397.2977METALLOPROTEASE TLDD
mRNA.BJAM.scaffold397.2978CAS SCAFFOLDING PROTEIN
mRNA.BJAM.scaffold397.2979ACID AMIDASE
mRNA.BJAM.scaffold397.2980ACID AMIDASE
mRNA.BJAM.scaffold397.2981ACID AMIDASE
mRNA.BJAM.scaffold397.2982LYSINE-SPECIFIC DEMETHYLASE
mRNA.BJAM.scaffold397.2983CONTACTIN 5
mRNA.BJAM.scaffold397.2984CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold3970.148692-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold3970.14870THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold3970.14871POLYSERASE-RELATED
mRNA.BJAM.scaffold3970.14872CYSTEINE-RICH SECRETORY PROTEIN-RELATED
mRNA.BJAM.scaffold3970.14873ARMADILLO REPEAT-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold3972.14874
mRNA.BJAM.scaffold3972.14875
mRNA.BJAM.scaffold3973.14876
mRNA.BJAM.scaffold3974.14877THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
mRNA.BJAM.scaffold3975.14878DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
mRNA.BJAM.scaffold3976.14879ANOCTAMIN
mRNA.BJAM.scaffold3976.14880TUDOR DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold3976.14881
mRNA.BJAM.scaffold3977.14882SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
mRNA.BJAM.scaffold3977.14883METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold3977.14884METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold3977.14885METABOTROPIC GLUTAMATE RECEPTOR
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