About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS11301EPOXIDE HYDROLASE 1-RELATED
HS11302DUAL SPECIFICITY PROTEIN KINASE
HS11303SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN
HS11304SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
HS11305SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
HS11306DELTA(14)-STEROL REDUCTASE
HS11307CONNEXIN
HS11308HEAT SHOCK TRANSCRIPTION FACTOR
HS11309SERINE INCORPORATOR
HS11310DUF914-RELATED
HS11311UNCHARACTERIZED
HS11312CONSORTIN
HS11313CHYMOTRYPSIN-RELATED
HS11314
HS11315HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
HS11316TGF-BETA FAMILY
HS11317MYOTONIC DYSTROPHY S/T KINASE-RELATED
HS11318FRIZZLED
HS11319UNCHARACTERIZED
HS11320
HS11321CALCIUM BINDING PROTEINS
HS11322RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
HS11323TUDOR DOMAIN CONTAINING PROTEIN
HS11324PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
HS11325INTEGRATOR COMPLEX SUBUNIT 9
HS11326GLUTAREDOXIN FAMILY MEMBER
HS11327UNCHARACTERIZED
HS11328MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
HS11329SERINE PROTEASE INHIBITOR, SERPIN
HS11330SI:CH211-196P9.1-RELATED
HS11331
HS11332SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS11333LP10445P
HS11334PROTEASOME SUBUNIT ALPHA/BETA
HS11335NF-KAPPA-B INHIBITOR ALPHA
HS11336CALCIUM BINDING PROTEIN
HS1133726S PROTEASOME REGULATORY SUBUNIT
HS11338POTASSIUM CHANNEL, SUBFAMILY K
HS11339ENDOGLIN/TGF-BETA RECEPTOR TYPE III
HS11340FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED
HS11341TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
HS11342GLYCOPROTEIN HORMONE RECEPTOR
HS11343CENTROSOMAL PROTEIN OF 128 KDA
HS11344PIKACHURIN-LIKE PROTEIN
HS11345REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS11346ENDONUCLEASE-RELATED
HS11347NUCLEAR PROTEIN SKIP-RELATED
HS11348CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
HS11349ISTHMIN-2
HS11350CYTOCHROME P450 FAMILY 46 SUBFAMILY A
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