The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000265l.42 | DYNACTIN SUBUNIT |
PMEG.utg000265l.43 | SERINE/THREONINE-PROTEIN KINASE 16 |
PMEG.utg000265l.44 | OXIDASE/PEROXIDASE |
PMEG.utg000265l.45 | VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1 |
PMEG.utg000265l.46 | GOLGIN |
PMEG.utg000265l.47 | METHYLTRANSFERASE |
PMEG.utg000265l.48 | SODIUM/NUCLEOSIDE COTRANSPORTER |
PMEG.utg000265l.49 | BETA TRANSDUCIN-RELATED PROTEIN |
PMEG.utg000265l.5 | CROSSVEINLESS 2 |
PMEG.utg000265l.50 | TGF-BETA FAMILY |
PMEG.utg000265l.51 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000265l.52 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000265l.53 | |
PMEG.utg000265l.54 | TUBULIN |
PMEG.utg000265l.55 | AGAP008005-PA |
PMEG.utg000265l.57 | MIXED LINEAGE PROTEIN KINASE |
PMEG.utg000265l.58 | LSM12 HOMOLOG |
PMEG.utg000265l.59 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
PMEG.utg000265l.6 | TELOMERE-ASSOCIATED PROTEIN RIF1 |
PMEG.utg000265l.60 | 2-HYDROXYACYL-COA LYASE |
PMEG.utg000265l.61 | |
PMEG.utg000265l.62 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
PMEG.utg000265l.63 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1 |
PMEG.utg000265l.64 | STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN |
PMEG.utg000265l.65 | UNCHARACTERIZED |
PMEG.utg000265l.66 | TRANSMEMBRANE PROTEIN 98 |
PMEG.utg000265l.67 | ATP-DEPENDENT RNA HELICASE DBP3 |
PMEG.utg000265l.68 | |
PMEG.utg000265l.69 | BETA LACTAMASE DOMAIN |
PMEG.utg000265l.7 | INTEGRIN ALPHA |
PMEG.utg000265l.70 | PHOSPHOLIPASE B, PLB1 |
PMEG.utg000265l.71 | |
PMEG.utg000265l.72 | TUBULIN |
PMEG.utg000265l.73 | SODIUM/NUCLEOSIDE COTRANSPORTER |
PMEG.utg000265l.74 | |
PMEG.utg000265l.75 | |
PMEG.utg000265l.76 | |
PMEG.utg000265l.77 | |
PMEG.utg000265l.78 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
PMEG.utg000265l.79 | APG9 AUTOPHAGY 9 |
PMEG.utg000265l.8 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
PMEG.utg000265l.80 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
PMEG.utg000265l.81 | |
PMEG.utg000265l.9 | INTEGRIN ALPHA |
PMEG.utg000266l.1 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
PMEG.utg000266l.2 | CUBILIN |
PMEG.utg000269l.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
PMEG.utg000269l.2 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
PMEG.utg000269l.3 | CUBILIN |
PMEG.utg000269l.4 |