The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000276l.34 | AGAP004327-PA |
PMEG.utg000276l.35 | HERMANSKY-PUDLAK SYNDROME PROTEIN 1 |
PMEG.utg000276l.36 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
PMEG.utg000276l.37 | POLYCOMB GROUP RING FINGER PROTEIN |
PMEG.utg000276l.38 | HOMEOBOX PROTEIN HMX |
PMEG.utg000276l.39 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
PMEG.utg000276l.4 | RCC1 DOMAIN-CONTAINING PROTEIN 1 |
PMEG.utg000276l.40 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
PMEG.utg000276l.41 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
PMEG.utg000276l.42 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL |
PMEG.utg000276l.43 | METAL TRANSPORTER CNNM |
PMEG.utg000276l.44 | RAS-RELATED PROTEIN RAB |
PMEG.utg000276l.46 | PROTEIN CBG11604 |
PMEG.utg000276l.47 | NUP107-RELATED |
PMEG.utg000276l.48 | BRCA2 AND CDKN1A INTERACTING PROTEIN |
PMEG.utg000276l.49 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000276l.5 | MYOTROPHIN |
PMEG.utg000276l.50 | UNCHARACTERIZED |
PMEG.utg000276l.51 | BC025462 PROTEIN |
PMEG.utg000276l.52 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
PMEG.utg000276l.53 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
PMEG.utg000276l.54 | |
PMEG.utg000276l.55 | MITOCHONDRIAL METAL TRANSPORTER 1-RELATED |
PMEG.utg000276l.56 | SMALL INTEGRAL MEMBRANE PROTEIN 8 |
PMEG.utg000276l.57 | ACYL-COA DEHYDROGENASE |
PMEG.utg000276l.58 | PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 |
PMEG.utg000276l.59 | PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 |
PMEG.utg000276l.6 | ENDO-1,4-BETA-GLUCANASE |
PMEG.utg000276l.60 | SH2 DOMAIN CONTAINING PROTEIN |
PMEG.utg000276l.61 | SYNAPTOBREVIN HOMOLOG YKT6 |
PMEG.utg000276l.62 | CYTOCHROME P450 26 |
PMEG.utg000276l.63 | MITOCHONDRIA-EATING PROTEIN-RELATED |
PMEG.utg000276l.64 | WD-REPEATCONTAINING PROTEIN WDR1 |
PMEG.utg000276l.65 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
PMEG.utg000276l.66 | RING/U-BOX SUPERFAMILY PROTEIN |
PMEG.utg000276l.67 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
PMEG.utg000276l.68 | PHYTOENE DEHYDROGENASE |
PMEG.utg000276l.69 | PROTEIN MIS12 HOMOLOG |
PMEG.utg000276l.7 | SUCCINATE DEHYDROGENASE |
PMEG.utg000276l.70 | TANDEM PH DOMAIN CONTAINING PROTEIN |
PMEG.utg000276l.71 | SLIT HOMOLOG |
PMEG.utg000276l.8 | ALDO/KETO REDUCTASE |
PMEG.utg000276l.9 | ALDO/KETO REDUCTASE |
PMEG.utg000277l.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
PMEG.utg000277l.2 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
PMEG.utg000277l.3 | AAA-FAMILY ATPASE |
PMEG.utg000277l.4 | TRANSLATION INITIATION FACTOR EIF3-RELATED |
PMEG.utg000278l.1 | |
PMEG.utg000279l.1 | MYOSIN |
PMEG.utg000279l.10 | ADENOSINE DEAMINASE |