About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Key Reference Paper

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000091l.80SYNAPTIC VESICLE GLYCOPROTEIN 2
PMEG.utg000091l.81FCH AND DOUBLE SH3 DOMAINS PROTEIN
PMEG.utg000091l.8228S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
PMEG.utg000091l.83PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
PMEG.utg000091l.84CYSTEINE PROTEASE FAMILY C1-RELATED
PMEG.utg000091l.85T-BOX PROTEIN-RELATED
PMEG.utg000091l.86UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PMEG.utg000091l.87HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
PMEG.utg000091l.89E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER
PMEG.utg000091l.9NADPH OXIDASE
PMEG.utg000091l.90MYOSIN
PMEG.utg000091l.91ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
PMEG.utg000091l.92NADH-CYTOCHROME B5 REDUCTASE
PMEG.utg000091l.93SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED
PMEG.utg000091l.94WD REPEAT CONTAINING PROTEIN 3 WDR3
PMEG.utg000092l.1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
PMEG.utg000092l.10ACYL-COA SYNTHETASE
PMEG.utg000092l.11MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PMEG.utg000092l.12ACROSIN-RELATED
PMEG.utg000092l.13UPF0462 PROTEIN
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