The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000256l.26 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000256l.27 | SOLUTE CARRIER FAMILY 39 |
| PMEG.utg000256l.28 | MERLIN/MOESIN/EZRIN/RADIXIN |
| PMEG.utg000256l.29 | |
| PMEG.utg000256l.3 | UNC-93 RELATED |
| PMEG.utg000256l.30 | MITOCHONDRIAL FISSION PROCESS PROTEIN 1 |
| PMEG.utg000256l.31 | AMYLOID PROTEIN-BINDING PROTEIN 2 |
| PMEG.utg000256l.32 | TRNA (URACIL-5-)-METHYLTRANSFERASE |
| PMEG.utg000256l.33 | |
| PMEG.utg000256l.34 | NFATC2-INTERACTING PROTEIN |
| PMEG.utg000256l.35 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| PMEG.utg000256l.36 | DNA-REPAIR PROTEIN XRCC1 |
| PMEG.utg000256l.37 | CARBONIC ANHYDRASE |
| PMEG.utg000256l.38 | CARBONIC ANHYDRASE |
| PMEG.utg000256l.4 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| PMEG.utg000256l.5 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| PMEG.utg000256l.6 | PHOSPHOLIPID ACYLTRANSFERASE |
| PMEG.utg000256l.7 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000256l.8 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
| PMEG.utg000256l.9 | |
| PMEG.utg000257l.1 | |
| PMEG.utg000257l.10 | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED |
| PMEG.utg000257l.11 | UNCHARACTERIZED |
| PMEG.utg000257l.12 | PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
| PMEG.utg000257l.13 | ARYLSULFATASE FAMILY MEMBER |
| PMEG.utg000257l.14 | ZINC FINGER PROTEIN |
| PMEG.utg000257l.15 | INTERFERON REGULATORY FACTOR |
| PMEG.utg000257l.16 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| PMEG.utg000257l.17 | TRANSMEMBRANE PROTEIN 189 |
| PMEG.utg000257l.18 | ZINC FINGER PROTEIN |
| PMEG.utg000257l.19 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
| PMEG.utg000257l.2 | |
| PMEG.utg000257l.20 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
| PMEG.utg000257l.21 | ACYLOXYACYL HYDROLASE |
| PMEG.utg000257l.22 | ACYLOXYACYL HYDROLASE |
| PMEG.utg000257l.3 | BROMODOMAIN CONTAINING PROTEIN |
| PMEG.utg000257l.4 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000257l.5 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
| PMEG.utg000257l.6 | L-FUCOSE KINASE |
| PMEG.utg000257l.7 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| PMEG.utg000257l.8 | PACHYTENE CHECKPOINT PROTEIN 2 |
| PMEG.utg000257l.9 | - |
| PMEG.utg000259l.1 | CARBOHYDRATE SULFOTRANSFERASE |
| PMEG.utg000259l.10 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| PMEG.utg000259l.100 | |
| PMEG.utg000259l.101 | CALPAIN |
| PMEG.utg000259l.102 | ZINC FINGER PROTEIN DZIP1 |
| PMEG.utg000259l.103 | ATP-BINDING CASSETTE SUB-FAMILY C |
| PMEG.utg000259l.104 | RHOMBOID-RELATED PROTEIN |
| PMEG.utg000259l.105 | MONOCARBOXYLATE TRANSPORTER |
