The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000251l.22 | MIP11318P |
PMEG.utg000251l.23 | ANNEXIN |
PMEG.utg000251l.24 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000251l.25 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
PMEG.utg000251l.26 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000251l.3 | MALE FERTILITY FACTOR KL5 |
PMEG.utg000251l.4 | STEERIN |
PMEG.utg000251l.5 | RAB GDP/GTP EXCHANGE FACTOR |
PMEG.utg000251l.6 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
PMEG.utg000251l.7 | |
PMEG.utg000251l.8 | ZGC:174356 |
PMEG.utg000251l.9 | STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15 |
PMEG.utg000252l.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000252l.10 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3B |
PMEG.utg000252l.100 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
PMEG.utg000252l.101 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
PMEG.utg000252l.102 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
PMEG.utg000252l.103 | |
PMEG.utg000252l.104 | |
PMEG.utg000252l.11 | PALMITOYLTRANSFERASE ZDHHC16 |
PMEG.utg000252l.12 | ENDONUCLEASE V |
PMEG.utg000252l.13 | THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1 |
PMEG.utg000252l.14 | URICASE AND TRANSTHYRETIN-RELATED |
PMEG.utg000252l.15 | IONOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000252l.16 | METHYLMALONYL-COA MUTASE |
PMEG.utg000252l.17 | |
PMEG.utg000252l.18 | |
PMEG.utg000252l.19 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
PMEG.utg000252l.2 | 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL |
PMEG.utg000252l.20 | CADHERIN-87A |
PMEG.utg000252l.21 | CEROID-LIPOFUSCINOSIS, NEURONAL 5 |
PMEG.utg000252l.22 | CALCIUM BINDING PROTEIN |
PMEG.utg000252l.23 | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT |
PMEG.utg000252l.24 | RNF121 PROTEIN |
PMEG.utg000252l.25 | MITOCHONDRIAL RIBOSOMAL PROTEIN L30 |
PMEG.utg000252l.26 | |
PMEG.utg000252l.27 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000252l.28 | HSC70-INTERACTING PROTEIN |
PMEG.utg000252l.29 | XAA-PRO AMINOPEPTIDASE 3 |
PMEG.utg000252l.3 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 |
PMEG.utg000252l.30 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
PMEG.utg000252l.31 | MULTIFUNCTIONAL PROTEIN ADE2 |
PMEG.utg000252l.32 | DOUBLECORTIN DOMAIN CONTAINING 2 |
PMEG.utg000252l.33 | |
PMEG.utg000252l.34 | MITOCHONDRIA-EATING PROTEIN-RELATED |
PMEG.utg000252l.35 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
PMEG.utg000252l.36 | TETRA THYMOSIN |
PMEG.utg000252l.37 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
PMEG.utg000252l.38 | UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT |
PMEG.utg000252l.39 | AMINO ACID TRANSPORTER |