The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000250l.23 | WD REPEAT AND HMG-BOX DNA BINDING PROTEIN |
| PMEG.utg000250l.230 | |
| PMEG.utg000250l.231 | EGL NINE HOMOLOG-RELATED |
| PMEG.utg000250l.24 | AUGMIN SUBUNIT 4 FAMILY MEMBER |
| PMEG.utg000250l.25 | TRNA METHYLTRANSFERASE |
| PMEG.utg000250l.26 | CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1 |
| PMEG.utg000250l.27 | POTASSIUM CHANNEL, SUBFAMILY K |
| PMEG.utg000250l.28 | - |
| PMEG.utg000250l.29 | GALECTIN |
| PMEG.utg000250l.3 | |
| PMEG.utg000250l.30 | ARYLSULFATASE FAMILY MEMBER |
| PMEG.utg000250l.31 | BETA-1,4-GALACTOSYLTRANSFERASE |
| PMEG.utg000250l.32 | CHROMOSOME 20 ORF85 FAMILY MEMBER |
| PMEG.utg000250l.33 | TRANSLATION INITIATION FACTOR-RELATED |
| PMEG.utg000250l.34 | COLLAGEN ALPHA |
| PMEG.utg000250l.35 | COLLAGEN ALPHA |
| PMEG.utg000250l.36 | |
| PMEG.utg000250l.37 | LEUCINE-RICH REPEAT-CONTAINING |
| PMEG.utg000250l.38 | TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE |
| PMEG.utg000250l.39 | |
| PMEG.utg000250l.4 | |
| PMEG.utg000250l.40 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
| PMEG.utg000250l.41 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| PMEG.utg000250l.42 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| PMEG.utg000250l.43 | TETRATRICOPEPTIDE REPEAT PROTEIN 13 |
| PMEG.utg000250l.44 | |
| PMEG.utg000250l.45 | DYNEIN REGULATORY COMPLEX PROTEIN 8 |
| PMEG.utg000250l.46 | PROTEIN PAXX |
| PMEG.utg000250l.47 | |
| PMEG.utg000250l.48 | SERINE/ARGININE RICH SPLICING FACTOR |
| PMEG.utg000250l.49 | ORF PROTEIN-RELATED |
| PMEG.utg000250l.5 | GLYCOPROTEIN HORMONE RECEPTOR |
| PMEG.utg000250l.50 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| PMEG.utg000250l.51 | |
| PMEG.utg000250l.52 | |
| PMEG.utg000250l.53 | UNCHARACTERIZED |
| PMEG.utg000250l.54 | SWAP-70 RECOMBINASE |
| PMEG.utg000250l.55 | UNCHARACTERIZED |
| PMEG.utg000250l.56 | AGAP002036-PA |
| PMEG.utg000250l.57 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
| PMEG.utg000250l.58 | - |
| PMEG.utg000250l.59 | MYOSIN HEAVY CHAIN - RELATED |
| PMEG.utg000250l.6 | PEROXIREDOXIN |
| PMEG.utg000250l.60 | E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED |
| PMEG.utg000250l.61 | THUMP DOMAIN-CONTAINING |
| PMEG.utg000250l.62 | ANKYRIN REPEAT CONTAINING |
| PMEG.utg000250l.63 | GLUTAREDOXIN FAMILY MEMBER |
| PMEG.utg000250l.64 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
| PMEG.utg000250l.65 | ZGC:174356 |
| PMEG.utg000250l.66 | NEPHROCYSTIN |
